[←][→] ath   AT3G15720 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0046658 [list] [network] anchored component of plasma membrane  (154 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (220 genes)  IDA  
GO:0031225 [list] [network] anchored component of membrane  (303 genes)  TAS  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_001078162.1  NP_001327674.1  NP_001327675.1  NP_566524.1 
BLAST NP_001078162.1  NP_001327674.1  NP_001327675.1  NP_566524.1 
Orthologous [Ortholog page] LOC103859637 (bra)  LOC103869879 (bra)  LOC103869880 (bra) 
Subcellular
localization
wolf
extr 3,  vacu 3,  golg 2,  chlo 1,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001078162.1)
cyto 2,  extr 2,  E.R. 2,  cyto_E.R. 2,  chlo 1,  nucl 1  (predict for NP_001327674.1)
extr 3,  vacu 3,  golg 2,  chlo 1,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001327675.1)
vacu 4,  extr 3,  golg 2,  E.R._vacu 2  (predict for NP_566524.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001078162.1)
other 8  (predict for NP_001327674.1)
scret 9  (predict for NP_001327675.1)
scret 9  (predict for NP_566524.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G15720 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.8 AT2G32280 GPI inositol-deacylase C, putative (DUF1218) [detail] 817788
4.5 AT5G11410 Protein kinase superfamily protein [detail] 831012
4.1 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein [detail] 839758
Coexpressed
gene list		 [Coexpressed gene list for AT3G15720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258252_at
258252_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258252_at
258252_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258252_at
258252_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820815      
Refseq ID (protein) NP_001078162.1 
NP_001327674.1 
NP_001327675.1 
NP_566524.1 


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