[←][→] ath   AT3G16230 Gene
functional annotation
Function   Putative eukaryotic LigT  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_001189909.1  NP_001189910.1  NP_001319566.1  NP_001326066.1  NP_001326067.1  NP_001326068.1  NP_001326069.1  NP_001326070.1  NP_001326071.1  NP_001326072.1  NP_001326073.1  NP_001326074.1  NP_001326075.1 
BLAST NP_001189909.1  NP_001189910.1  NP_001319566.1  NP_001326066.1  NP_001326067.1  NP_001326068.1  NP_001326069.1  NP_001326070.1  NP_001326071.1  NP_001326072.1  NP_001326073.1  NP_001326074.1  NP_001326075.1 
Orthologous [Ortholog page] AT3G16220 (ath)  LOC4325893 (osa)  LOC4325894 (osa)  LOC7475086 (ppo)  LOC11420973 (mtr)  LOC100266864 (vvi)  LOC100785531 (gma)  LOC101249781 (sly)  LOC101268850 (sly)  LOC103649543 (zma)  LOC103840105 (bra)  LOC103840113 (bra)  LOC103859659 (bra) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_001189909.1)
cyto 4,  nucl 3,  chlo 1,  plas 1,  golg_plas 1  (predict for NP_001189910.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_001319566.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001326066.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for NP_001326067.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for NP_001326068.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for NP_001326069.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001326070.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for NP_001326071.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for NP_001326072.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001326073.1)
cyto 4,  nucl 3,  chlo 1,  plas 1,  golg_plas 1  (predict for NP_001326074.1)
cyto 4,  cysk 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001326075.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001189909.1)
other 3  (predict for NP_001189910.1)
mito 8  (predict for NP_001319566.1)
mito 8  (predict for NP_001326066.1)
mito 8  (predict for NP_001326067.1)
mito 8  (predict for NP_001326068.1)
mito 8  (predict for NP_001326069.1)
mito 8  (predict for NP_001326070.1)
mito 8  (predict for NP_001326071.1)
mito 8  (predict for NP_001326072.1)
mito 8  (predict for NP_001326073.1)
other 3  (predict for NP_001326074.1)
other 9  (predict for NP_001326075.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath01200 Carbon metabolism 2
ath04146 Peroxisome 2
Genes directly connected with AT3G16230 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 QPT quinolinate phoshoribosyltransferase [detail] 814663
5.8 AT4G32560 paramyosin-like protein [detail] 829391
5.6 AT4G29490 Metallopeptidase M24 family protein [detail] 829070
5.0 ARPC1A actin-related protein C1A [detail] 817641
4.8 CPA Subunits of heterodimeric actin filament capping protein Capz superfamily [detail] 819717
4.8 CNX3 cofactor of nitrate reductase and xanthine dehydrogenase 3 [detail] 839445
Coexpressed
gene list		 [Coexpressed gene list for AT3G16230]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258053_at
258053_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258053_at
258053_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258053_at
258053_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820869      
Refseq ID (protein) NP_001189909.1 
NP_001189910.1 
NP_001319566.1 
NP_001326066.1 
NP_001326067.1 
NP_001326068.1 
NP_001326069.1 
NP_001326070.1 
NP_001326071.1 
NP_001326072.1 
NP_001326073.1 
NP_001326074.1 
NP_001326075.1 


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