[←][→] ath   At3g16470 Gene
functional annotation
Function   Mannose-binding lectin superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEP TAS  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEP TAS  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0030246 [list] [network] carbohydrate binding  (156 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001189913.1  NP_001319568.1  NP_001326890.1  NP_566547.2 
BLAST NP_001189913.1  NP_001319568.1  NP_001326890.1  NP_566547.2 
Orthologous [Ortholog page] LOC103869757 (bra) 
Subcellular
localization
wolf
cysk 5,  mito 2,  extr 1,  nucl 1,  pero 1  (predict for NP_001189913.1)
cysk 4,  mito 2,  cysk_plas 2,  extr 1,  pero 1  (predict for NP_001319568.1)
cysk 4,  mito 2,  cysk_plas 2,  extr 1,  pero 1  (predict for NP_001326890.1)
cyto 4,  cysk 4,  mito 1,  extr 1,  pero 1  (predict for NP_566547.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001189913.1)
other 9  (predict for NP_001319568.1)
other 9  (predict for NP_001326890.1)
other 9  (predict for NP_566547.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with JR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.8 TSA1 TSK-associating protein 1 [detail] 841671
10.4 BGLU18 beta glucosidase 18 [detail] 841670
9.4 VSP1 vegetative storage protein 1 [detail] 832547
9.0 DHAR1 dehydroascorbate reductase [detail] 838544
8.2 CEP3 Cysteine proteinases superfamily protein [detail] 823993
8.1 VSP2 vegetative storage protein 2 [detail] 832546
7.9 AT1G31710 Copper amine oxidase family protein [detail] 840058
7.5 IGMT5 O-methyltransferase family protein [detail] 844013
7.4 AT4G17470 alpha/beta-Hydrolases superfamily protein [detail] 827458
7.2 AT4G23670 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 828467
6.8 CYP710A2 cytochrome P450, family 710, subfamily A, polypeptide 2 [detail] 818012
6.5 AT1G06640 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 837173
6.4 AT4G29700 Alkaline-phosphatase-like family protein [detail] 829091
5.9 AT2G43550 scorpion toxin-like knottin superfamily protein [detail] 818957
5.5 GCL1 GCR2-like 1 [detail] 836653
5.0 AT2G29710 UDP-Glycosyltransferase superfamily protein [detail] 817521
4.8 AT3G55290 NAD(P)-binding Rossmann-fold superfamily protein [detail] 824695
Coexpressed
gene list		 [Coexpressed gene list for JR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259383_at
259383_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259383_at
259383_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259383_at
259383_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820895      
Refseq ID (protein) NP_001189913.1 
NP_001319568.1 
NP_001326890.1 
NP_566547.2 


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