[←][→] ath   At3g16840 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (45 genes)  IEA  
KEGG
Protein NP_001326753.1  NP_188307.3 
BLAST NP_001326753.1  NP_188307.3 
Orthologous [Ortholog page] LOC4336370 (osa)  LOC7460001 (ppo)  LOC11421104 (mtr)  LOC100806018 (gma)  LOC101265585 (sly)  LOC103839437 (bra)  LOC123046009 (tae)  LOC123053880 (tae)  LOC123189765 (tae)  LOC123427218 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for NP_001326753.1)
nucl 7,  cyto 3  (predict for NP_188307.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001326753.1)
other 8  (predict for NP_188307.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with AT3G16840 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.7 EDA25 CCAAT-binding factor [detail] 843576
13.6 AT2G18220 Noc2p family [detail] 816337
12.6 AT3G01160 pre-rRNA-processing ESF1-like protein [detail] 820504
10.9 AT4G26190 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 828725
7.9 CIP4.1 COP1-interacting protein 4.1 [detail] 827980
7.4 GLE1 nucleoporin GLE1-like protein [detail] 837869
Coexpressed
gene list		 [Coexpressed gene list for AT3G16840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257648_at
257648_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257648_at
257648_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257648_at
257648_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820937      
Refseq ID (protein) NP_001326753.1 
NP_188307.3 


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