| functional annotation |
| Function |
response regulator 1 |
|
| GO BP |
|
GO:0090506 [list] [network] axillary shoot meristem initiation
|
(9 genes)
|
IMP
|
 |
|
GO:0080113 [list] [network] regulation of seed growth
|
(14 genes)
|
IMP
|
|
|
GO:0080036 [list] [network] regulation of cytokinin-activated signaling pathway
|
(16 genes)
|
IMP
|
|
|
GO:0010492 [list] [network] maintenance of shoot apical meristem identity
|
(18 genes)
|
IGI
|
|
|
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process
|
(19 genes)
|
IGI
|
|
|
GO:0031537 [list] [network] regulation of anthocyanin metabolic process
|
(26 genes)
|
IGI
|
|
|
GO:0010082 [list] [network] regulation of root meristem growth
|
(27 genes)
|
IMP
|
|
|
GO:0080022 [list] [network] primary root development
|
(32 genes)
|
IGI
|
|
|
GO:0009736 [list] [network] cytokinin-activated signaling pathway
|
(66 genes)
|
IGI
TAS
|
|
|
GO:0071368 [list] [network] cellular response to cytokinin stimulus
|
(68 genes)
|
IMP
|
|
|
GO:0009735 [list] [network] response to cytokinin
|
(102 genes)
|
IGI
IMP
|
|
|
GO:0000160 [list] [network] phosphorelay signal transduction system
|
(234 genes)
|
IEA
|
|
|
GO:0009414 [list] [network] response to water deprivation
|
(361 genes)
|
IEP
IGI
IMP
|
|
|
GO:0048364 [list] [network] root development
|
(482 genes)
|
IMP
|
|
|
GO:0048367 [list] [network] shoot system development
|
(812 genes)
|
IGI
|
|
|
| GO CC |
|
| GO MF |
|
GO:0000156 [list] [network] phosphorelay response regulator activity
|
(33 genes)
|
ISS
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
IDA
ISS
|
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
ath04075 [list] [network] Plant hormone signal transduction (273 genes) |
 |
| Protein |
NP_001325499.1
NP_566561.2
NP_850600.2
|
| BLAST |
NP_001325499.1
NP_566561.2
NP_850600.2
|
| Orthologous |
[Ortholog page]
RR2 (ath)
LOC11420048 (mtr)
LOC25494105 (mtr)
LOC100263661 (vvi)
LOC100781087 (gma)
LOC100781102 (gma)
LOC100809583 (gma)
LOC100814930 (gma)
LOC101266334 (sly)
LOC101267446 (sly)
LOC103859684 (bra)
LOC103860825 (bra)
LOC103869728 (bra)
LOC103870141 (bra)
|
Subcellular
localization
wolf |
|
nucl 8,
cyto 1,
plas 1,
cysk 1,
cysk_plas 1,
cyto_plas 1
|
(predict for NP_001325499.1)
|
|
nucl 9
|
(predict for NP_566561.2)
|
|
nucl 9,
plas 1,
cysk 1,
cysk_plas 1
|
(predict for NP_850600.2)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001325499.1)
|
|
other 3,
chlo 3
|
(predict for NP_566561.2)
|
|
other 3,
chlo 3
|
(predict for NP_850600.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04075 |
Plant hormone signal transduction |
3 |
 |
| ath00500 |
Starch and sucrose metabolism |
3 |
 |
Genes directly connected with RR1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 7.0 |
RR2 |
response regulator 2 |
[detail] |
827297 |
| 5.3 |
D6PKL1 |
D6 protein kinase like 1 |
[detail] |
828768 |
| 5.1 |
TPS9 |
trehalose-phosphatase/synthase 9 |
[detail] |
838998 |
| 3.9 |
TRM19 |
afadin |
[detail] |
824522 |
|
Coexpressed
gene list |
[Coexpressed gene list for RR1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
257649_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
257649_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
257649_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT3G16857 Gene
