[][] ath   AT3G17060 Gene
functional annotation
Function   Pectin lyase-like superfamily protein
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IBA IEA  
GO:0042545 [list] [network] cell wall modification  (176 genes)  IEA  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO MF
GO:0045330 [list] [network] aspartyl esterase activity  (67 genes)  IEA  
GO:0030599 [list] [network] pectinesterase activity  (86 genes)  IBA  
KEGG
Protein NP_188331.1 
BLAST NP_188331.1 
Orthologous [Ortholog page] LOC4332625 (osa)LOC7485900 (ppo)LOC11412480 (mtr)LOC100267053 (vvi)LOC100280019 (zma)LOC100792967 (gma)LOC103859697 (bra)LOC103869717 (bra)LOC109119119 (sly)
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  chlo 2,  mito 1,  vacu 1  (predict for NP_188331.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_188331.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT3G17060 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
13.4 AT1G51250 Plant self-incompatibility protein S1 family [detail] 841548
12.7 AT1G11765 Plant self-incompatibility protein S1 family [detail] 837721
11.9 AT5G26692 Putative membrane lipoprotein [detail] 832711
7.5 PTEN1 Calcium/lipid-binding (CaLB) phosphatase [detail] 833936
6.3 AT1G17540 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [detail] 838328
5.8 AT3G19310 PLC-like phosphodiesterases superfamily protein [detail] 821465
5.5 CYP76C3 cytochrome P450, family 76, subfamily C, polypeptide 3 [detail] 819166
5.1 AT5G64790 O-Glycosyl hydrolases family 17 protein [detail] 836600
Coexpressed
gene list
[Coexpressed gene list for AT3G17060]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257886_at
257886_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257886_at
257886_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
257886_at
257886_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 820963    
Refseq ID (protein) NP_188331.1 


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