[←][→] ath   At3g17240 Gene
functional annotation
Function   lipoamide dehydrogenase 2      
GO BP
GO:0045454 [list] [network] cell redox homeostasis  (27 genes)  IEA  
GO CC
GO:0005747 [list] [network] mitochondrial respiratory chain complex I  (56 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO MF
GO:0004148 [list] [network] dihydrolipoyl dehydrogenase activity  (3 genes)  IMP  
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0005524 [list] [network] ATP binding  (253 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00280 [list] [network] Valine, leucine and isoleucine degradation (52 genes)
ath00310 [list] [network] Lysine degradation (31 genes)
ath00380 [list] [network] Tryptophan metabolism (64 genes)
ath00620 [list] [network] Pyruvate metabolism (97 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00640 [list] [network] Propanoate metabolism (41 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_566570.3  NP_566571.1  NP_851005.1 
BLAST NP_566570.3  NP_566571.1  NP_851005.1 
Orthologous [Ortholog page] LOC544237 (sly)  LOC547523 (gma)  FLBR (gma)  mtLPD1 (ath)  LOC4326980 (osa)  LOC4337881 (osa)  LOC7471086 (ppo)  LOC7485860 (ppo)  LOC25494137 (mtr)  LOC100788043 (gma)  LOC101245444 (sly)  LOC103869701 (bra)  LOC103871503 (bra)  LOC123038886 (tae)  LOC123108104 (tae)  LOC123114079 (tae)  LOC123180227 (tae)  LOC123180603 (tae)  LOC123189229 (tae)  LOC123409249 (hvu)  LOC123426241 (hvu) 
Subcellular
localization
wolf
cyto 4,  mito 4,  chlo 3  (predict for NP_566570.3)
mito 6,  chlo 3,  cyto_mito 3,  mito_plas 3  (predict for NP_566571.1)
cyto 4,  mito 4,  chlo 3  (predict for NP_851005.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_566570.3)
mito 8  (predict for NP_566571.1)
mito 9  (predict for NP_851005.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 16
ath01200 Carbon metabolism 16
ath01210 2-Oxocarboxylic acid metabolism 5
ath01230 Biosynthesis of amino acids 5
ath00010 Glycolysis / Gluconeogenesis 4
Genes directly connected with mtLPD2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.0 IDH1 isocitrate dehydrogenase 1 [detail] 829679
11.0 IAR4 thiamine diphosphate-binding fold (THDP-binding) superfamily protein [detail] 839031
10.6 IDH-V isocitrate dehydrogenase V [detail] 831884
9.6 AT4G26910 Dihydrolipoamide succinyltransferase [detail] 828798
8.6 SDH1-1 succinate dehydrogenase 1-1 [detail] 836809
8.6 AT5G55070 Dihydrolipoamide succinyltransferase [detail] 835598
8.6 AT3G55410 2-oxoglutarate dehydrogenase, E1 component [detail] 824707
8.1 AT5G17380 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein [detail] 831604
6.1 GR1 glutathione-disulfide reductase [detail] 822003
5.8 AT3G24180 Beta-glucosidase, GBA2 type family protein [detail] 822004
Coexpressed
gene list		 [Coexpressed gene list for mtLPD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258439_at
258439_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258439_at
258439_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258439_at
258439_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820984      
Refseq ID (protein) NP_566570.3 
NP_566571.1 
NP_851005.1 


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