[][] ath   At3g17300 Gene
functional annotation
Function   COMPLEX 1 LYR-like protein
GO BP
GO:0043436 [list] [network] oxoacid metabolic process  (1714 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001319576.1  NP_001327125.1  NP_566572.1 
BLAST NP_001319576.1  NP_001327125.1  NP_566572.1 
Orthologous [Ortholog page] LOC7485862 (ppo)LOC9268407 (osa)LOC11413876 (mtr)LOC100786927 (gma)LOC101264317 (sly)LOC103839380 (bra)LOC103859704 (bra)LOC123102539 (tae)LOC123110730 (tae)LOC123119728 (tae)LOC123133659 (tae)LOC123143563 (tae)LOC123397689 (hvu)LOC123404112 (hvu)
Subcellular
localization
wolf
cyto 6,  extr 2,  nucl 1,  mito 1  (predict for NP_001319576.1)
cyto 3,  cyto_nucl 3,  nucl 2,  extr 1,  mito 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001327125.1)
cyto 3,  cyto_nucl 3,  nucl 2,  extr 1,  mito 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_566572.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for NP_001319576.1)
chlo 3,  other 3  (predict for NP_001327125.1)
chlo 3,  other 3  (predict for NP_566572.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03018 RNA degradation 2
ath03040 Spliceosome 2
Genes directly connected with EMB2786 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT5G44710 37S ribosomal protein S27 [detail] 834500
8.4 EMB2816 Small nuclear ribonucleoprotein family protein [detail] 814913
8.1 AT1G05205 hexokinase-1 protein [detail] 839266
7.5 AT5G18790 Ribosomal protein L33 family protein [detail] 831997
5.7 AT5G58005 Cytochrome c oxidase, subunit Vib family protein [detail] 835912
5.2 AT5G15220 Ribosomal protein L27 family protein [detail] 831374
Coexpressed
gene list
[Coexpressed gene list for EMB2786]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258413_at
258413_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258413_at
258413_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258413_at
258413_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 820993    
Refseq ID (protein) NP_001319576.1 
NP_001327125.1 
NP_566572.1 


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