[←][→] ath   AT3G17440 Gene
functional annotation
Function   Putative plant snare 13  
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_001030716.1  NP_566578.1 
BLAST NP_001030716.1  NP_566578.1 
Orthologous [Ortholog page] NPSN12 (ath)  LOC4332931 (osa)  LOC4344040 (osa)  LOC7477198 (ppo)  LOC11446715 (mtr)  LOC25486607 (mtr)  LOC100251065 (vvi)  LOC100273395 (zma)  LOC100285150 (zma)  LOC100778540 (gma)  LOC100795077 (gma)  LOC101248280 (sly)  LOC103647882 (zma)  LOC103839252 (bra)  LOC103859709 (bra)  LOC103869684 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 1,  cysk 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001030716.1)
nucl 4,  cyto 3,  vacu 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_566578.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001030716.1)
other 7  (predict for NP_566578.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04933 AGE-RAGE signaling pathway in diabetic complications 2
Genes directly connected with NPSN13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 ROP2 RHO-related protein from plants 2 [detail] 838598
7.5 ARAC5 RAC-like GTP binding protein 5 [detail] 843917
7.5 NPSN12 Putative plant snare 12 [detail] 841244
6.4 AT5G47180 Plant VAMP (vesicle-associated membrane protein) family protein [detail] 834764
5.6 AT3G56930 DHHC-type zinc finger family protein [detail] 824860
5.1 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 839497
4.8 AT2G44770 ELMO/CED-12 family protein [detail] 819086
4.6 IAA18 indole-3-acetic acid inducible 18 [detail] 841623
Coexpressed
gene list		 [Coexpressed gene list for NPSN13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257269_at
257269_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257269_at
257269_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257269_at
257269_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821008      
Refseq ID (protein) NP_001030716.1 
NP_566578.1 


The preparation time of this page was 0.2 [sec].