[←][→] ath   At3g17590 Gene
functional annotation
Function   transcription regulatory protein SNF5, putative (BSH)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006338 [list] [network] chromatin remodeling  (106 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003682 [list] [network] chromatin binding  (105 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03250 [list] [network] Viral life cycle - HIV-1 (39 genes)
Protein NP_001189918.1  NP_001326663.1  NP_566581.1 
BLAST NP_001189918.1  NP_001326663.1  NP_566581.1 
Orthologous [Ortholog page] LOC4330573 (osa)  LOC7496492 (ppo)  LOC11438224 (mtr)  SNF5 (gma)  LOC101255453 (sly)  LOC101256344 (sly)  LOC103869676 (bra)  LOC123110967 (tae)  LOC123180358 (tae)  LOC123190533 (tae)  LOC123423952 (hvu) 
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 2  (predict for NP_001189918.1)
chlo 3,  nucl 3,  cyto 1,  mito 1,  cysk_nucl 1  (predict for NP_001326663.1)
chlo 4,  cyto 2,  mito 2,  nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_566581.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for NP_001189918.1)
mito 5,  other 5  (predict for NP_001326663.1)
mito 5,  other 5  (predict for NP_566581.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with BSH on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 ARP4 actin-related protein 4 [detail] 838425
8.0 AT1G30880 uncharacterized protein [detail] 839972
7.9 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family protein [detail] 818760
7.5 AT4G28830 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 829004
7.0 AT4G28820 HIT-type Zinc finger family protein [detail] 829003
6.3 Fes1C Fes1C [detail] 831805
5.9 RAC3 RAC-like 3 [detail] 829654
5.6 RABE1e RAB GTPase homolog E1E [detail] 820148
Coexpressed
gene list		 [Coexpressed gene list for BSH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258405_at
258405_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258405_at
258405_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258405_at
258405_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821025      
Refseq ID (protein) NP_001189918.1 
NP_001326663.1 
NP_566581.1 


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