[][] ath   AT3G18660 Gene
functional annotation
Function   plant glycogenin-like starch initiation protein 1
GO BP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process  (12 genes)  IMP  
GO:0045492 [list] [network] xylan biosynthetic process  (35 genes)  IDA IGI  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (58 genes)  IGI  
GO:0005982 [list] [network] starch metabolic process  (59 genes)  IMP  
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0080116 [list] [network] glucuronoxylan glucuronosyltransferase activity  (4 genes)  IMP  
GO:0015020 [list] [network] glucuronosyltransferase activity  (21 genes)  IDA  
GO:0016757 [list] [network] transferase activity, transferring glycosyl groups  (644 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001030722.1  NP_001189927.1  NP_566615.1 
BLAST NP_001030722.1  NP_001189927.1  NP_566615.1 
Orthologous [Ortholog page] PGSIP2 (ath)LOC4324841 (osa)LOC7466731 (ppo)LOC7466834 (ppo)LOC7492448 (ppo)LOC9271451 (osa)LOC11424982 (mtr)LOC25482405 (mtr)LOC100193311 (zma)LOC100245489 (vvi)LOC100248912 (vvi)LOC100272808 (zma)LOC100286027 (zma)LOC100780439 (gma)LOC100783884 (gma)LOC100787339 (gma)LOC100796246 (gma)LOC100809361 (gma)LOC101245416 (sly)LOC101263017 (sly)LOC103835744 (bra)LOC103837916 (bra)LOC103869539 (bra)LOC103872986 (bra)
Subcellular
localization
wolf
nucl 3,  mito 1,  mito_plas 1,  cyto 1,  golg 1,  cysk_nucl 1  (predict for NP_001030722.1)
nucl 3,  cyto 2,  golg 1,  cysk_nucl 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001189927.1)
nucl 3,  cyto 2,  golg 1,  cysk_nucl 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_566615.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001030722.1)
chlo 8  (predict for NP_001189927.1)
chlo 7  (predict for NP_566615.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PGSIP1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
18.7 IRX3 Cellulose synthase family protein [detail] 831608
16.8 CTL2 chitinase-like protein [detail] 820947
16.4 ESK1 trichome birefringence-like protein (DUF828) [detail] 824765
13.2 NAC073 NAC domain containing protein 73 [detail] 828968
12.5 LAC10 laccase 10 [detail] 831697
7.6 AT1G66810 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 842999
5.5 AT1G09440 Protein kinase superfamily protein [detail] 837467
4.8 AT1G76250 transmembrane protein [detail] 843958
4.1 IRX14-L Nucleotide-diphospho-sugar transferases superfamily protein [detail] 836858
Coexpressed
gene list
[Coexpressed gene list for PGSIP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257757_at
257757_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257757_at
257757_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
257757_at
257757_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 821397    
Refseq ID (protein) NP_001030722.1 
NP_001189927.1 
NP_566615.1 


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