functional annotation |
Function |
plant glycogenin-like starch initiation protein 1 |
|
GO BP |
GO:0010417 [list] [network] glucuronoxylan biosynthetic process
|
(12 genes)
|
IMP
|
|
GO:0045492 [list] [network] xylan biosynthetic process
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(35 genes)
|
IDA
IGI
|
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GO:0009834 [list] [network] plant-type secondary cell wall biogenesis
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(58 genes)
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IGI
|
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GO:0005982 [list] [network] starch metabolic process
|
(59 genes)
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IMP
|
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GO:0071555 [list] [network] cell wall organization
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(538 genes)
|
IEA
|
|
|
GO CC |
GO:0000139 [list] [network] Golgi membrane
|
(404 genes)
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IEA
|
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GO:0005794 [list] [network] Golgi apparatus
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(1430 genes)
|
IDA
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
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ISM
|
|
|
GO MF |
GO:0080116 [list] [network] glucuronoxylan glucuronosyltransferase activity
|
(4 genes)
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IMP
|
|
GO:0015020 [list] [network] glucuronosyltransferase activity
|
(21 genes)
|
IDA
|
|
GO:0016757 [list] [network] transferase activity, transferring glycosyl groups
|
(644 genes)
|
ISS
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
|
KEGG |
|
|
Protein |
NP_001030722.1
NP_001189927.1
NP_566615.1
|
BLAST |
NP_001030722.1
NP_001189927.1
NP_566615.1
|
Orthologous |
[Ortholog page]
PGSIP2 (ath)
LOC4324841 (osa)
LOC7466731 (ppo)
LOC7466834 (ppo)
LOC7492448 (ppo)
LOC9271451 (osa)
LOC11424982 (mtr)
LOC25482405 (mtr)
LOC100193311 (zma)
LOC100245489 (vvi)
LOC100248912 (vvi)
LOC100272808 (zma)
LOC100286027 (zma)
LOC100780439 (gma)
LOC100783884 (gma)
LOC100787339 (gma)
LOC100796246 (gma)
LOC100809361 (gma)
LOC101245416 (sly)
LOC101263017 (sly)
LOC103835744 (bra)
LOC103837916 (bra)
LOC103869539 (bra)
LOC103872986 (bra)
|
Subcellular localization wolf |
nucl 3,
mito 1,
mito_plas 1,
cyto 1,
golg 1,
cysk_nucl 1
|
(predict for NP_001030722.1)
|
nucl 3,
cyto 2,
golg 1,
cysk_nucl 1,
mito_plas 1,
cyto_E.R. 1
|
(predict for NP_001189927.1)
|
nucl 3,
cyto 2,
golg 1,
cysk_nucl 1,
mito_plas 1,
cyto_E.R. 1
|
(predict for NP_566615.1)
|
|
Subcellular localization TargetP |
chlo 7
|
(predict for NP_001030722.1)
|
chlo 8
|
(predict for NP_001189927.1)
|
chlo 7
|
(predict for NP_566615.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with PGSIP1 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
18.7 |
IRX3 |
Cellulose synthase family protein |
[detail] |
831608 |
16.8 |
CTL2 |
chitinase-like protein |
[detail] |
820947 |
16.4 |
ESK1 |
trichome birefringence-like protein (DUF828) |
[detail] |
824765 |
13.2 |
NAC073 |
NAC domain containing protein 73 |
[detail] |
828968 |
12.5 |
LAC10 |
laccase 10 |
[detail] |
831697 |
7.6 |
AT1G66810 |
Zinc finger C-x8-C-x5-C-x3-H type family protein |
[detail] |
842999 |
5.5 |
AT1G09440 |
Protein kinase superfamily protein |
[detail] |
837467 |
4.8 |
AT1G76250 |
transmembrane protein |
[detail] |
843958 |
4.1 |
IRX14-L |
Nucleotide-diphospho-sugar transferases superfamily protein |
[detail] |
836858 |
|
Coexpressed gene list |
[Coexpressed gene list for PGSIP1]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
257757_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
257757_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
257757_at
X axis is samples (xls file), and Y axis is log-expression.
|