ATTED-II : GeneID search result

[←][→] ath AT3G18780 Gene

functional annotation

Function

actin 2

GO BP

GO:0048768 [list] [network] root hair cell tip growth	(23 genes)	IMP
GO:0010218 [list] [network] response to far red light	(54 genes)	IEP
GO:0009644 [list] [network] response to high light intensity	(65 genes)	IEP
GO:0048767 [list] [network] root hair elongation	(66 genes)	IMP
GO:0010114 [list] [network] response to red light	(74 genes)	IEP
GO:0009735 [list] [network] response to cytokinin	(102 genes)	IEP
GO:0010053 [list] [network] root epidermal cell differentiation	(127 genes)	IMP

GO CC

GO:0005856 [list] [network] cytoskeleton	(368 genes)	IEA
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA RCA
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA ISM

GO MF

GO:0005200 [list] [network] structural constituent of cytoskeleton	(30 genes)	TAS
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001319585.1 NP_001327851.1 NP_188508.1

BLAST

NP_001319585.1 NP_001327851.1 NP_188508.1

Orthologous

[Ortholog page] ACT1 (ath) AT2G42100 (ath) ACT11 (ath) ACT12 (ath) ACT3 (ath) ACT7 (ath) ACT4 (ath) ACT8 (ath) LOC4325068 (osa) LOC4333919 (osa) LOC4334702 (osa) LOC4337566 (osa) LOC4338914 (osa) LOC4349087 (osa) LOC4349863 (osa) LOC4351585 (osa) LOC4352927 (osa) LOC7490729 (ppo) LOC7492024 (ppo) LOC9269066 (osa) LOC11425201 (mtr) LOC11428527 (mtr) LOC11431140 (mtr) LOC11441933 (mtr) LOC25479628 (mtr) LOC25487878 (mtr) LOC25495077 (mtr) LOC100191561 (zma) LOC100232866 (vvi) LOC100244452 (vvi) LOC100246726 (vvi) LOC100246825 (vvi) LOC100253833 (vvi) LOC100273396 (zma) LOC100273404 (zma) LOC100280540 (zma) LOC100281811 (zma) LOC100282267 (zma) LOC100283878 (zma) LOC100284092 (zma) LOC100304239 (zma) LOC100381643 (zma) LOC100777460 (gma) LOC100777705 (gma) ACTIN (gma) LOC100781142 (gma) LOC100781831 (gma) LOC100787265 (gma) LOC100789000 (gma) ACTIN (gma) LOC100797704 (gma) ACTIN (gma) SOY69 (gma) LOC100799890 (gma) LOC100807341 (gma) LOC100811630 (gma) LOC100813210 (gma) LOC100813437 (gma) LOC100815472 (gma) LOC101249734 (sly) LOC101250165 (sly) LOC101253675 (sly) LOC101255046 (sly) actin (sly) LOC101262163 (sly) Tom52 (sly) LOC101264220 (sly) ACT (sly) LOC101264618 (sly) LOC103625937 (zma) LOC103629275 (zma) LOC103629276 (zma) LOC103635981 (zma) LOC103838412 (bra) LOC103841298 (bra) LOC103845362 (bra) LOC103850356 (bra) LOC103855835 (bra) LOC103856636 (bra) LOC103857724 (bra) LOC103859774 (bra) LOC103863285 (bra) LOC103865617 (bra) LOC103867177 (bra) LOC103870277 (bra) LOC103873303 (bra) LOC103873596 (bra) LOC103873698 (bra)

Subcellular
localization
wolf

cysk 10	(predict for NP_001319585.1)
cysk 10	(predict for NP_001327851.1)
cysk 10	(predict for NP_188508.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001319585.1)
other 8	(predict for NP_001327851.1)
other 8	(predict for NP_188508.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	5

Genes directly connected with ACT2 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
10.2	ACT8	actin 8	[detail]	841347
8.6	TUB4	tubulin beta chain 4	[detail]	834459
5.7	PP2A-4	protein phosphatase 2A-4	[detail]	825019

Coexpressed
gene list

[Coexpressed gene list for ACT2]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257749_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257749_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257749_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	821411
Refseq ID (protein)	NP_001319585.1
	NP_001327851.1
	NP_188508.1

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