| functional annotation |
| Function |
cell elongation protein / DWARF1 / DIMINUTO (DIM) |
|
| GO BP |
|
GO:0016132 [list] [network] brassinosteroid biosynthetic process
|
(22 genes)
|
IMP
|
 |
|
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis
|
(58 genes)
|
IMP
|
|
|
GO:0006694 [list] [network] steroid biosynthetic process
|
(63 genes)
|
IMP
|
|
|
GO:0009808 [list] [network] lignin metabolic process
|
(71 genes)
|
IMP
|
|
|
GO:0008202 [list] [network] steroid metabolic process
|
(90 genes)
|
IBA
|
|
|
GO:0009826 [list] [network] unidimensional cell growth
|
(279 genes)
|
IMP
|
|
|
GO:0009416 [list] [network] response to light stimulus
|
(700 genes)
|
IMP
|
|
|
GO:0055114 [list] [network] oxidation-reduction process
|
(1468 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0050614 [list] [network] delta24-sterol reductase activity
|
(1 genes)
|
IEA
|
|
|
GO:0016628 [list] [network] oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
|
(32 genes)
|
IBA
|
|
|
GO:0071949 [list] [network] FAD binding
|
(68 genes)
|
IEA
|
|
|
GO:0005516 [list] [network] calmodulin binding
|
(182 genes)
|
IDA
|
|
|
GO:0003824 [list] [network] catalytic activity
|
(8756 genes)
|
IMP
|
|
|
| KEGG |
ath00100 [list] [network] Steroid biosynthesis (35 genes) |
 |
| Protein |
NP_001319595.1
NP_188616.1
NP_850616.1
|
| BLAST |
NP_001319595.1
NP_188616.1
NP_850616.1
|
| Orthologous |
[Ortholog page]
LOC542549 (zma)
LOC543937 (sly)
LOC4348555 (osa)
LOC7481591 (ppo)
LOC25492834 (mtr)
LOC100258158 (vvi)
LOC100791799 (gma)
LOC100814521 (gma)
SSR2 (sly)
LOC103836950 (bra)
LOC103869418 (bra)
|
Subcellular
localization
wolf |
|
cyto 5,
cyto_nucl 4,
mito 1,
nucl 1,
chlo_mito 1
|
(predict for NP_001319595.1)
|
|
cyto 5,
cyto_nucl 4,
mito 1,
nucl 1,
chlo_mito 1
|
(predict for NP_188616.1)
|
|
cyto 5,
cyto_nucl 4,
mito 1,
nucl 1,
chlo_mito 1
|
(predict for NP_850616.1)
|
|
Subcellular
localization
TargetP |
|
mito 8,
other 6
|
(predict for NP_001319595.1)
|
|
mito 8,
other 6
|
(predict for NP_188616.1)
|
|
mito 8,
other 6
|
(predict for NP_850616.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00620 |
Pyruvate metabolism |
8 |
 |
| ath01200 |
Carbon metabolism |
8 |
 |
| ath00010 |
Glycolysis / Gluconeogenesis |
7 |
 |
| ath00020 |
Citrate cycle (TCA cycle) |
5 |
 |
| ath00061 |
Fatty acid biosynthesis |
4 |
 |
Genes directly connected with DWF1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 7.0 |
LPD1 |
lipoamide dehydrogenase 1 |
[detail] |
820951 |
| 6.6 |
CPI1 |
cyclopropyl isomerase |
[detail] |
835105 |
| 6.6 |
LTA2 |
2-oxoacid dehydrogenases acyltransferase family protein |
[detail] |
822181 |
| 6.3 |
FPS1 |
farnesyl diphosphate synthase 1 |
[detail] |
834828 |
| 6.2 |
AT2G05790 |
O-Glycosyl hydrolases family 17 protein |
[detail] |
815130 |
| 6.0 |
TUB2 |
tubulin beta chain 2 |
[detail] |
836390 |
| 5.7 |
SMT1 |
sterol methyltransferase 1 |
[detail] |
831216 |
|
Coexpressed
gene list |
[Coexpressed gene list for DWF1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
257938_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
257938_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
257938_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT3G19820 Gene
