[←][→] ath   At3g20010 Gene
functional annotation
Function   SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein      
GO BP
GO:0080188 [list] [network] gene silencing by RNA-directed DNA methylation  (38 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001319598.1  NP_001327756.1  NP_001327757.1  NP_001327758.1  NP_001327759.1  NP_001327760.1  NP_001327761.1  NP_188635.1 
BLAST NP_001319598.1  NP_001327756.1  NP_001327757.1  NP_001327758.1  NP_001327759.1  NP_001327760.1  NP_001327761.1  NP_188635.1 
Orthologous [Ortholog page] AT3G16600 (ath)  AT1G11100 (ath)  AT1G50410 (ath)  EDA16 (ath)  LOC4326436 (osa)  LOC4337089 (osa)  LOC4344820 (osa)  LOC7485570 (ppo)  LOC7490807 (ppo)  LOC7497758 (ppo)  LOC11428547 (mtr)  LOC25485683 (mtr)  LOC100527790 (gma)  LOC100792901 (gma)  LOC100795142 (gma)  LOC100802436 (gma)  LOC100805307 (gma)  LOC100811598 (gma)  LOC101243943 (sly)  LOC101251257 (sly)  LOC103829491 (bra)  LOC103830370 (bra)  LOC103849633 (bra)  LOC103859836 (bra)  LOC103869369 (bra)  LOC103871349 (bra)  LOC117125856 (bra)  LOC123062243 (tae)  LOC123070991 (tae)  LOC123079373 (tae)  LOC123147146 (tae)  LOC123160731 (tae)  LOC123165699 (tae)  LOC123412809 (hvu)  LOC123444563 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001319598.1)
nucl 10  (predict for NP_001327756.1)
nucl 10  (predict for NP_001327757.1)
nucl 10  (predict for NP_001327758.1)
nucl 10  (predict for NP_001327759.1)
nucl 10  (predict for NP_001327760.1)
nucl 10  (predict for NP_001327761.1)
nucl 10  (predict for NP_188635.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001319598.1)
other 7,  chlo 5  (predict for NP_001327756.1)
other 8  (predict for NP_001327757.1)
other 7  (predict for NP_001327758.1)
other 7,  chlo 5  (predict for NP_001327759.1)
other 7,  chlo 5  (predict for NP_001327760.1)
other 7,  chlo 5  (predict for NP_001327761.1)
other 7,  chlo 5  (predict for NP_188635.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
ath03013 Nucleocytoplasmic transport 2
ath03410 Base excision repair 2
ath03430 Mismatch repair 2
ath03440 Homologous recombination 2
Genes directly connected with AT3G20010 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 CPSF160 cleavage and polyadenylation specificity factor 160 [detail] 835240
6.9 NRPD1B nuclear RNA polymerase D1B [detail] 818591
6.1 PMS1 DNA mismatch repair protein [detail] 827997
6.0 FRS11 FAR1-related sequence 11 [detail] 837563
Coexpressed
gene list		 [Coexpressed gene list for AT3G20010]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256625_at
256625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256625_at
256625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256625_at
256625_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821539      
Refseq ID (protein) NP_001319598.1 
NP_001327756.1 
NP_001327757.1 
NP_001327758.1 
NP_001327759.1 
NP_001327760.1 
NP_001327761.1 
NP_188635.1 


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