[←][→] ath   At3g20330 Gene
functional annotation
Function   PYRIMIDINE B    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009220 [list] [network] pyrimidine ribonucleotide biosynthetic process  (17 genes)  IGI  
GO:0016036 [list] [network] cellular response to phosphate starvation  (111 genes)  IEP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0004070 [list] [network] aspartate carbamoyltransferase activity  (1 genes)  IGI  
GO:0016597 [list] [network] amino acid binding  (15 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00240 [list] [network] Pyrimidine metabolism (64 genes)
ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_001326915.1  NP_188668.1 
BLAST NP_001326915.1  NP_188668.1 
Orthologous [Ortholog page] pyrB (sly)  LOC4345071 (osa)  LOC7478712 (ppo)  LOC11426800 (mtr)  LOC11437903 (mtr)  LOC100787097 (gma)  LOC100796746 (gma)  LOC100802354 (gma)  LOC100815285 (gma)  LOC103869333 (bra)  LOC123102911 (tae)  LOC123111087 (tae)  LOC123120027 (tae)  LOC123426378 (hvu) 
Subcellular
localization
wolf
chlo 8,  extr 1  (predict for NP_001326915.1)
chlo 8,  extr 1  (predict for NP_188668.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326915.1)
chlo 9  (predict for NP_188668.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00250 Alanine, aspartate and glutamate metabolism 3
ath01240 Biosynthesis of cofactors 3
ath03020 RNA polymerase 2
ath03018 RNA degradation 2
ath00240 Pyrimidine metabolism 2
Genes directly connected with PYRB on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.0 CARA carbamoyl phosphate synthetase A [detail] 822396
7.1 RPS10 ribosomal protein S10 [detail] 821799
6.1 ATRPAC42 DNA-directed RNA polymerase family protein [detail] 842377
Coexpressed
gene list		 [Coexpressed gene list for PYRB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257680_at
257680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257680_at
257680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257680_at
257680_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821577      
Refseq ID (protein) NP_001326915.1 
NP_188668.1 


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