[←][→] ath   AT3G20330 Gene
functional annotation
Function   PYRIMIDINE B  
GO BP
GO:0044205 [list] [network] 'de novo' UMP biosynthetic process  (6 genes)  IEA  
GO:0006207 [list] [network] 'de novo' pyrimidine nucleobase biosynthetic process  (9 genes)  IEA  
GO:0009220 [list] [network] pyrimidine ribonucleotide biosynthetic process  (22 genes)  IGI  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IEP  
GO:0006520 [list] [network] cellular amino acid metabolic process  (369 genes)  IEA  
GO:0006807 [list] [network] nitrogen compound metabolic process  (6704 genes)  IBA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004070 [list] [network] aspartate carbamoyltransferase activity  (1 genes)  IBA IGI  
GO:0016597 [list] [network] amino acid binding  (26 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00240 [list] [network] Pyrimidine metabolism (57 genes)
ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)
Protein NP_001326915.1  NP_188668.1 
BLAST NP_001326915.1  NP_188668.1 
Orthologous [Ortholog page] pyrB (sly)  LOC4345071 (osa)  LOC7478712 (ppo)  LOC11426800 (mtr)  LOC11437903 (mtr)  LOC100246977 (vvi)  LOC100282373 (zma)  LOC100282482 (zma)  LOC100787097 (gma)  LOC100796746 (gma)  LOC100802354 (gma)  LOC100815285 (gma)  LOC103869333 (bra) 
Subcellular
localization
wolf
chlo 8,  extr 1  (predict for NP_001326915.1)
chlo 8,  extr 1  (predict for NP_188668.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326915.1)
chlo 9  (predict for NP_188668.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath00290 Valine, leucine and isoleucine biosynthesis 5
ath01210 2-Oxocarboxylic acid metabolism 4
ath00250 Alanine, aspartate and glutamate metabolism 4
ath00770 Pantothenate and CoA biosynthesis 3
Genes directly connected with PYRB on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 CARA carbamoyl phosphate synthetase A [detail] 822396
6.3 AT3G14390 Pyridoxal-dependent decarboxylase family protein [detail] 820660
6.3 RPS10 ribosomal protein S10 [detail] 821799
Coexpressed
gene list		 [Coexpressed gene list for PYRB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257680_at
257680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257680_at
257680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257680_at
257680_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821577      
Refseq ID (protein) NP_001326915.1 
NP_188668.1 


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