[←][→] ath   At3g20390 Gene
functional annotation
Function   endoribonuclease L-PSP family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009082 [list] [network] branched-chain amino acid biosynthetic process  (22 genes)  IMP  
GO CC
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0019239 [list] [network] deaminase activity  (12 genes)  IDA  
KEGG
Protein NP_001327365.1  NP_188674.1 
BLAST NP_001327365.1  NP_188674.1 
Orthologous [Ortholog page] LOC4343379 (osa)  LOC7454441 (ppo)  LOC7459161 (ppo)  LOC11425862 (mtr)  LOC18110344 (ppo)  LOC25488952 (mtr)  LOC100500302 (gma)  LOC100527559 (gma)  CHRD (sly)  LOC100785544 (gma)  LOC100792467 (gma)  CHRDi (sly)  LOC103849487 (bra)  LOC103859855 (bra)  LOC103869329 (bra)  LOC117125622 (bra)  LOC123044680 (tae)  LOC123052549 (tae)  LOC123188429 (tae)  LOC123425896 (hvu) 
Subcellular
localization
wolf
chlo 3,  E.R. 3,  plas 2,  chlo_mito 2  (predict for NP_001327365.1)
chlo 9  (predict for NP_188674.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001327365.1)
chlo 4,  mito 3  (predict for NP_188674.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00920 Sulfur metabolism 3
ath00270 Cysteine and methionine metabolism 2
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ath00480 Glutathione metabolism 2
Genes directly connected with AT3G20390 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.8 AT1G44790 ChaC-like family protein [detail] 841043
6.4 AT5G44720 Molybdenum cofactor sulfurase family protein [detail] 834501
6.0 PPa6 pyrophosphorylase 6 [detail] 830824
4.7 PAI2 phosphoribosylanthranilate isomerase 2 [detail] 830442
Coexpressed
gene list		 [Coexpressed gene list for AT3G20390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257674_at
257674_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257674_at
257674_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257674_at
257674_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821584      
Refseq ID (protein) NP_001327365.1 
NP_188674.1 


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