functional annotation |
Function |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
|
GO BP |
GO:0070544 [list] [network] histone H3-K36 demethylation
|
(1 genes)
|
IDA
|
|
GO:0042752 [list] [network] regulation of circadian rhythm
|
(57 genes)
|
IMP
|
|
GO:0007623 [list] [network] circadian rhythm
|
(111 genes)
|
IMP
|
|
GO:0009908 [list] [network] flower development
|
(447 genes)
|
IEA
|
|
GO:0055114 [list] [network] oxidation-reduction process
|
(1468 genes)
|
IEA
|
|
|
GO CC |
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
IEA
ISM
|
|
GO:0005737 [list] [network] cytoplasm
|
(14855 genes)
|
IEA
|
|
|
GO MF |
GO:0046975 [list] [network] histone methyltransferase activity (H3-K36 specific)
|
(6 genes)
|
IDA
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
IPI
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
KEGG |
|
|
Protein |
NP_001030733.1
NP_001327066.1
NP_001327067.1
NP_566667.1
NP_850617.1
|
BLAST |
NP_001030733.1
NP_001327066.1
NP_001327067.1
NP_566667.1
NP_850617.1
|
Orthologous |
[Ortholog page]
LOC4347435 (osa)
LOC7496047 (ppo)
LOC9269734 (osa)
LOC25492610 (mtr)
LOC100267241 (vvi)
LOC100272621 (zma)
LOC100779376 (gma)
LOC100813075 (gma)
JMJ524 (sly)
JMJ30 (bra)
|
Subcellular localization wolf |
cyto 5,
nucl 3,
cyto_pero 3
|
(predict for NP_001030733.1)
|
cyto 4,
nucl 4,
nucl_plas 3,
plas 1
|
(predict for NP_001327066.1)
|
cyto 6,
nucl 3,
cyto_pero 3,
cyto_E.R. 3,
cyto_plas 3
|
(predict for NP_001327067.1)
|
nucl 4,
cyto 4,
chlo 1,
mito 1,
extr 1,
chlo_mito 1
|
(predict for NP_566667.1)
|
nucl 5,
cyto 4,
chlo 1,
mito 1,
chlo_mito 1
|
(predict for NP_850617.1)
|
|
Subcellular localization TargetP |
other 7
|
(predict for NP_001030733.1)
|
other 7
|
(predict for NP_001327066.1)
|
other 7
|
(predict for NP_001327067.1)
|
other 7
|
(predict for NP_566667.1)
|
other 7
|
(predict for NP_850617.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath04712 |
Circadian rhythm - plant |
2 |
|
Genes directly connected with JMJD5 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
11.2 |
COL9 |
CONSTANS-like 9 |
[detail] |
819956 |
10.7 |
COR27 |
cold regulated protein 27 |
[detail] |
834301 |
8.6 |
TOC1 |
CCT motif -containing response regulator protein |
[detail] |
836259 |
8.3 |
HCAR |
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family |
[detail] |
839472 |
7.2 |
BOA |
Homeodomain-like superfamily protein |
[detail] |
836076 |
6.7 |
AT2G40085 |
hypothetical protein |
[detail] |
2745588 |
|
Coexpressed gene list |
[Coexpressed gene list for JMJD5]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
257985_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
257985_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
257985_at
X axis is samples (xls file), and Y axis is log-expression.
|