[←][→] ath   AT3G21240 Gene
functional annotation
Function   4-coumarate:CoA ligase 2  
GO BP
GO:0009411 [list] [network] response to UV  (120 genes)  IEP  
GO:0009698 [list] [network] phenylpropanoid metabolic process  (124 genes)  TAS  
GO:0009611 [list] [network] response to wounding  (212 genes)  IEP  
GO:0009620 [list] [network] response to fungus  (595 genes)  IEP  
GO CC
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (38 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (166 genes)
ath00999 [list] [network] Biosynthesis of secondary metabolites - unclassified (12 genes)
Protein NP_001327048.1  NP_001327049.1  NP_188761.1 
BLAST NP_001327048.1  NP_001327049.1  NP_188761.1 
Orthologous [Ortholog page] LOC542166 (zma)  4CL2 (gma)  4CL1 (ath)  LOC4328485 (osa)  LOC4341718 (osa)  LOC4345054 (osa)  LOC4345717 (osa)  LOC11429318 (mtr)  LOC25488009 (mtr)  LOC100191997 (zma)  LOC100254698 (vvi)  LOC100265063 (vvi)  LOC100779668 (gma)  LOC100780741 (gma)  LOC100819192 (gma)  LOC101245039 (sly)  LOC101248210 (sly)  4CL (sly)  LOC101251197 (sly)  LOC103868556 (bra)  LOC103869195 (bra) 
Subcellular
localization
wolf
plas 6,  chlo 1,  cyto 1,  vacu 1,  cysk 1,  chlo_mito 1  (predict for NP_001327048.1)
plas 6,  chlo 1,  cyto 1,  vacu 1,  cysk 1,  chlo_mito 1  (predict for NP_001327049.1)
plas 9  (predict for NP_188761.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001327048.1)
other 9  (predict for NP_001327049.1)
other 9  (predict for NP_188761.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 12
ath01230 Biosynthesis of amino acids 6
ath00999 Biosynthesis of secondary metabolites - unclassified 5
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
Genes directly connected with 4CL2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.1 4CL1 4-coumarate:CoA ligase 1 [detail] 841593
10.8 LysoPL2 lysophospholipase 2 [detail] 841709
10.5 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 829551
10.4 4CL5 4-coumarate:CoA ligase 5 [detail] 821677
8.4 AT2G45290 Transketolase [detail] 819137
7.7 PAL4 phenylalanine ammonia-lyase 4 [detail] 820196
6.6 MYB63 myb domain protein 63 [detail] 844259
5.6 ADT5 arogenate dehydratase 5 [detail] 832326
5.2 ABCG29 pleiotropic drug resistance 1 [detail] 820881
Coexpressed
gene list		 [Coexpressed gene list for 4CL2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258047_at
258047_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258047_at
258047_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258047_at
258047_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821678      
Refseq ID (protein) NP_001327048.1 
NP_001327049.1 
NP_188761.1 


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