[←][→] ath   AT3G21430 Gene
functional annotation
Function   DNA binding protein  
GO BP
GO:0006351 [list] [network] transcription, DNA-templated  (186 genes)  IEA  
GO:0051726 [list] [network] regulation of cell cycle  (216 genes)  IBA  
GO:0000003 [list] [network] reproduction  (1767 genes)  IBA  
GO CC
GO:0017053 [list] [network] transcriptional repressor complex  (13 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319608.1  NP_001325832.1  NP_001325833.1 
BLAST NP_001319608.1  NP_001325832.1  NP_001325833.1 
Orthologous [Ortholog page] LOC7475371 (ppo)  LOC9272548 (osa)  LOC11415119 (mtr)  LOC11426420 (mtr)  LOC100261468 (vvi)  LOC100266555 (vvi)  LOC100272535 (zma)  LOC100781646 (gma)  LOC100789533 (gma)  LOC100811517 (gma)  LOC100816217 (gma)  LOC101249204 (sly)  LOC101265115 (sly)  LOC103869173 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 2,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001319608.1)
nucl 6,  chlo 2,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001325832.1)
nucl 6,  chlo 2,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001325833.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for NP_001319608.1)
chlo 6,  other 4  (predict for NP_001325832.1)
chlo 6,  other 4  (predict for NP_001325833.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ALY3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 CHR5 chromatin remodeling 5 [detail] 815823
8.4 TTN8 Structural maintenance of chromosomes (SMC) family protein [detail] 824632
8.2 SNL1 SIN3-like 1 [detail] 821265
8.0 SNL5 SIN3-like 5 [detail] 842283
7.7 AT5G43560 TRAF-like superfamily protein [detail] 834376
7.1 SNL6 paired amphipathic helix Sin3-like protein [detail] 837584
Coexpressed
gene list		 [Coexpressed gene list for ALY3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256809_at
256809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256809_at
256809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256809_at
256809_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821697      
Refseq ID (protein) NP_001319608.1 
NP_001325832.1 
NP_001325833.1 


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