[←][→] ath   At3g22380 Gene
functional annotation
Function   time for coffee    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0005982 [list] [network] starch metabolic process  (54 genes)  IMP  
GO:0042752 [list] [network] regulation of circadian rhythm  (61 genes)  IEA IMP  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IMP  
GO:0032502 [list] [network] developmental process  (5717 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
KEGG
Protein NP_001118676.1  NP_001326717.1  NP_566705.1 
BLAST NP_001118676.1  NP_001326717.1  NP_566705.1 
Orthologous [Ortholog page] LOC4343665 (osa)  LOC7457865 (ppo)  LOC7459029 (ppo)  LOC11415129 (mtr)  LOC18096674 (ppo)  LOC100783097 (gma)  LOC100799922 (gma)  LOC101257597 (sly)  LOC102667391 (gma)  LOC103834588 (bra)  LOC103859954 (bra)  LOC117125710 (bra)  LOC117134442 (bra)  LOC123044484 (tae)  LOC123052349 (tae)  LOC123188194 (tae)  LOC123397440 (hvu)  LOC123405666 (hvu)  LOC123425631 (hvu)  LOC123448189 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001118676.1)
nucl 9,  cyto_nucl 5  (predict for NP_001326717.1)
nucl 9,  cyto_nucl 5  (predict for NP_566705.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001118676.1)
mito 6  (predict for NP_001326717.1)
mito 6  (predict for NP_566705.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TIC on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.6 AT3G50370 uncharacterized protein [detail] 824199
8.1 CCT RNA polymerase II transcription mediator [detail] 827954
7.9 AT3G61690 nucleotidyltransferase [detail] 825342
6.7 TKL TIC-like protein [detail] 825493
5.8 AT5G55040 DNA-binding bromodomain-containing protein [detail] 835595
Coexpressed
gene list		 [Coexpressed gene list for TIC]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258444_at
258444_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258444_at
258444_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258444_at
258444_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821807      
Refseq ID (protein) NP_001118676.1 
NP_001326717.1 
NP_566705.1 


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