[←][→] ath   AT3G22590 Gene
functional annotation
Function   PLANT HOMOLOGOUS TO PARAFIBROMIN  
GO BP
GO:0034402 [list] [network] recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex  (2 genes)  IBA  
GO:0051568 [list] [network] histone H3-K4 methylation  (10 genes)  IMP  
GO:0006368 [list] [network] transcription elongation from RNA polymerase II promoter  (12 genes)  IEA  
GO:0032968 [list] [network] positive regulation of transcription elongation from RNA polymerase II promoter  (17 genes)  IBA  
GO:0009911 [list] [network] positive regulation of flower development  (40 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO CC
GO:0070860 [list] [network] RNA polymerase I core factor complex  (2 genes)  ISS  
GO:0016593 [list] [network] Cdc73/Paf1 complex  (7 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (18 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_188898.1 
BLAST NP_188898.1 
Orthologous [Ortholog page] LOC4333654 (osa)  LOC7474195 (ppo)  LOC11444212 (mtr)  LOC100257939 (vvi)  LOC100527734 (gma)  LOC101258962 (sly)  LOC103626013 (zma)  LOC103869024 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_plas 3  (predict for NP_188898.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188898.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PHP on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [detail] 822039
6.3 CSN6A COP9 signalosome subunit 6A [detail] 835727
5.8 THO7 Tho complex subunit 7/Mft1p [detail] 821174
5.7 ULP1A UB-like protease 1A [detail] 819876
4.5 AT2G30960 myosin-M heavy chain-like protein [detail] 817647
Coexpressed
gene list		 [Coexpressed gene list for PHP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256928_at
256928_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256928_at
256928_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256928_at
256928_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821831      
Refseq ID (protein) NP_188898.1 


The preparation time of this page was 0.2 [sec].