[←][→] ath   At3g23100 Gene
functional annotation
Function   DNA ligase IV-binding protein      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008022 [list] [network] protein C-terminus binding  (5 genes)  IPI  
GO:0005524 [list] [network] ATP binding  (253 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03450 [list] [network] Non-homologous end-joining (8 genes)
Protein NP_001154639.1  NP_188951.2 
BLAST NP_001154639.1  NP_188951.2 
Orthologous [Ortholog page] AT1G61410 (ath)  LOC4334058 (osa)  LOC11419613 (mtr)  LOC18102488 (ppo)  LOC100797038 (gma)  LOC100798519 (gma)  LOC100859940 (tae)  LOC101252591 (sly)  LOC103833938 (bra)  LOC123113259 (tae)  LOC123122774 (tae)  LOC123452159 (hvu) 
Subcellular
localization
wolf
nucl 6,  mito 3  (predict for NP_001154639.1)
nucl 6,  mito 3  (predict for NP_188951.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001154639.1)
other 8  (predict for NP_188951.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with XRCC4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.8 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 [detail] 842435
5.0 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 841809
4.9 AT1G31220 Formyl transferase [detail] 840010
4.4 AT1G01670 RING/U-box superfamily protein [detail] 839365
Coexpressed
gene list		 [Coexpressed gene list for XRCC4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257762_at
257762_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257762_at
257762_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257762_at
257762_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821885      
Refseq ID (protein) NP_001154639.1 
NP_188951.2 


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