ATTED-II : GeneID search result

[←][→] ath At3g23330 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4228 genes)

ISM

GO MF

KEGG

Protein

NP_001325805.1 NP_188975.3

BLAST

NP_001325805.1 NP_188975.3

Orthologous

[Ortholog page] LOC4343715 (osa) LOC11406568 (mtr) LOC18094773 (ppo) LOC100810402 (gma) LOC101254838 (sly) LOC103828751 (bra) LOC123044129 (tae) LOC123052011 (tae) LOC123187877 (tae) LOC123425218 (hvu)

Subcellular
localization
wolf

vacu 4, chlo 1, nucl 1, cyto 1, mito 1, plas 1, extr 1, E.R. 1, golg 1, cyto_nucl 1, nucl_plas 1, golg_plas 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001325805.1)
chlo 4, mito 4, chlo_mito 4	(predict for NP_188975.3)

Subcellular
localization
TargetP

other 5, scret 3	(predict for NP_001325805.1)
other 3, chlo 3	(predict for NP_188975.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G23330 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
12.5	AT4G02750	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	828187
10.9	AT3G03580	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	821229
10.8	AT5G52850	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	835362
8.7	AT1G71060	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	843446
8.3	AT2G32630	Pentatricopeptide repeat (PPR-like) superfamily protein	[detail]	817823
8.1	AT1G16480	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	838218

Coexpressed
gene list

[Coexpressed gene list for AT3G23330]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258292_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258292_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258292_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	821914
Refseq ID (protein)	NP_001325805.1
Refseq ID (protein)	NP_188975.3

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