[←][→] ath   At3g24340 Gene
functional annotation
Function   chromatin remodeling 40      
GO BP
GO:1900370 [list] [network] positive regulation of post-transcriptional gene silencing by RNA  (6 genes)  IMP  
GO:0080188 [list] [network] gene silencing by RNA-directed DNA methylation  (38 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (21 genes)  IEA  
KEGG ath03440 [list] [network] Homologous recombination (60 genes)
Protein NP_189077.1 
BLAST NP_189077.1 
Orthologous [Ortholog page] chr31 (ath)  LOC4338690 (osa)  LOC18105083 (ppo)  LOC25493137 (mtr)  LOC25497866 (mtr)  LOC25498158 (mtr)  LOC25499904 (mtr)  LOC25499905 (mtr)  LOC25499907 (mtr)  LOC25499908 (mtr)  LOC100806733 (gma)  LOC100807262 (gma)  LOC100812737 (gma)  LOC101245395 (sly)  LOC101252104 (sly)  LOC101257794 (sly)  LOC101265473 (sly)  LOC103828642 (bra)  LOC103844121 (bra)  LOC103860031 (bra)  LOC104645619 (sly)  LOC104647043 (sly)  LOC104647688 (sly)  LOC107277028 (osa)  LOC123054507 (tae)  LOC123061480 (tae)  LOC123061640 (tae)  LOC123070118 (tae)  LOC123078563 (tae)  LOC123131456 (tae)  LOC123181895 (tae)  LOC123442278 (hvu)  LOC123443876 (hvu) 
Subcellular
localization
wolf
nucl 5,  chlo 2,  mito 2,  chlo_mito 2  (predict for NP_189077.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for NP_189077.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CHR40 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.7 AT3G04980 DNAJ heat shock N-terminal domain-containing protein [detail] 819658
5.6 AT1G26540 Agenet domain-containing protein [detail] 839194
5.5 AT1G49920 MuDR family transposase [detail] 841415
Coexpressed
gene list		 [Coexpressed gene list for CHR40]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257167_at
257167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257167_at
257167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257167_at
257167_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822023      
Refseq ID (protein) NP_189077.1 


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