[][] ath   AT3G24670 Gene
functional annotation
Function   Pectin lyase-like superfamily protein
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_189110.1 
BLAST NP_189110.1 
Orthologous [Ortholog page] 9612 (sly)AT3G07010 (ath)AT3G24230 (ath)AT3G27400 (ath)AT4G13210 (ath)AT4G13710 (ath)AT4G24780 (ath)AT5G48900 (ath)AT5G63180 (ath)AT1G67750 (ath)LOC4335013 (osa)LOC7453817 (ppo)LOC7458080 (ppo)LOC7460526 (ppo)LOC7467675 (ppo)LOC7469382 (ppo)LOC7481246 (ppo)LOC7488611 (ppo)LOC7494805 (ppo)LOC11408829 (mtr)LOC11409358 (mtr)LOC11411484 (mtr)LOC11413286 (mtr)LOC11426383 (mtr)LOC25483116 (mtr)LOC25489517 (mtr)LOC100101868 (gma)PL1 (vvi)PEL (vvi)LOC100242302 (vvi)LOC100243265 (vvi)LOC100251082 (vvi)LOC100273705 (zma)LOC100281162 (zma)LOC100781845 (gma)LOC100782388 (gma)LOC100790659 (gma)LOC100794814 (gma)LOC100803068 (gma)LOC100809277 (gma)LOC100810380 (gma)LOC100816256 (gma)LOC101244298 (sly)LOC101252082 (sly)PL (sly)LOC101254639 (sly)LOC101263458 (sly)LOC103828610 (bra)LOC103828688 (bra)LOC103831011 (bra)LOC103831201 (bra)LOC103833411 (bra)LOC103834896 (bra)LOC103836561 (bra)LOC103836991 (bra)LOC103837270 (bra)LOC103837461 (bra)LOC103852424 (bra)LOC103854567 (bra)LOC103861505 (bra)LOC103862557 (bra)LOC103863605 (bra)LOC103863641 (bra)LOC103870710 (bra)LOC103873738 (bra)LOC103875221 (bra)
Subcellular
localization
wolf
extr 3,  vacu 3,  chlo 2,  nucl 1,  mito 1,  golg 1  (predict for NP_189110.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_189110.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
Genes directly connected with AT3G24670 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.5 AT2G34910 root hair specific protein [detail] 818056
5.5 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 [detail] 831446
5.2 AT2G47540 Pollen Ole e 1 allergen and extensin family protein [detail] 819367
Coexpressed
gene list
[Coexpressed gene list for AT3G24670]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256900_at
256900_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256900_at
256900_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
256900_at
256900_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 822063    
Refseq ID (protein) NP_189110.1 


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