[←][→] ath   AT3G25840 Gene
functional annotation
Function   Protein kinase superfamily protein  
GO BP
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (11 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001078208.1  NP_189213.2 
BLAST NP_001078208.1  NP_189213.2 
Orthologous [Ortholog page] AT3G53640 (ath)  AT1G13350 (ath)  LOC4352925 (osa)  LOC25485518 (mtr)  LOC100247382 (vvi)  LOC100502407 (zma)  LOC100776908 (gma)  LOC100784523 (gma)  LOC100814081 (gma)  LOC101246632 (sly)  LOC103650321 (zma)  LOC103839354 (bra)  LOC103875345 (bra) 
Subcellular
localization
wolf
cyto 7,  nucl 1,  pero 1  (predict for NP_001078208.1)
nucl 8,  cyto 1  (predict for NP_189213.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001078208.1)
chlo 6,  other 4  (predict for NP_189213.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with AT3G25840 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.4 AT1G20920 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 838685
8.9 AT1G10890 arginine/glutamate-rich 1 protein [detail] 837632
8.9 AT4G12670 Homeodomain-like superfamily protein [detail] 826879
7.7 AT5G63370 Protein kinase superfamily protein [detail] 836456
7.7 AT3G05670 RING/U-box protein [detail] 819734
6.6 AT2G25760 Protein kinase family protein [detail] 817118
6.3 AT1G13350 Protein kinase superfamily protein [detail] 837895
Coexpressed
gene list		 [Coexpressed gene list for AT3G25840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256995_at
256995_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256995_at
256995_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256995_at
256995_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822178      
Refseq ID (protein) NP_001078208.1 
NP_189213.2 


The preparation time of this page was 0.2 [sec].