[←][→] ath   At3g25940 Gene
functional annotation
Function   TFIIB zinc-binding protein      
GO BP
GO:0006379 [list] [network] mRNA cleavage  (9 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3100 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (52 genes)
Protein NP_566786.1 
BLAST NP_566786.1 
Orthologous [Ortholog page] LOC4333888 (osa)  LOC7481723 (ppo)  LOC11424547 (mtr)  LOC100527489 (gma)  LOC100784235 (gma)  LOC101268675 (sly)  LOC103829455 (bra)  LOC103872808 (bra)  LOC112420268 (mtr)  LOC120577857 (mtr)  LOC120577861 (mtr)  LOC120580026 (mtr)  LOC123087107 (tae)  LOC123090856 (tae)  LOC123095863 (tae)  LOC123115750 (tae)  LOC123447452 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_566786.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for NP_566786.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03020 RNA polymerase 2
Genes directly connected with AT3G25940 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.7 AT1G75670 DNA-directed RNA polymerase [detail] 843901
8.9 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 [detail] 835314
8.6 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 820738
7.7 AT5G09380 RNA polymerase III RPC4 [detail] 830797
7.1 ELP6 elongator protein 6 [detail] 826600
Coexpressed
gene list		 [Coexpressed gene list for AT3G25940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258079_at
258079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258079_at
258079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258079_at
258079_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822191      
Refseq ID (protein) NP_566786.1 


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