[←][→] ath   At3g26560 Gene
functional annotation
Function   ATP-dependent RNA helicase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048573 [list] [network] photoperiodism, flowering  (94 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_189288.1 
BLAST NP_189288.1 
Orthologous [Ortholog page] LOC4329095 (osa)  LOC7485208 (ppo)  LOC9267698 (osa)  LOC11443762 (mtr)  LOC18105660 (ppo)  LOC25482189 (mtr)  LOC100781090 (gma)  LOC100790809 (gma)  LOC100815173 (gma)  LOC101266273 (sly)  LOC101267328 (sly)  LOC103875292 (bra)  LOC123085981 (tae)  LOC123091843 (tae)  LOC123096920 (tae)  LOC123147742 (tae)  LOC123156097 (tae)  LOC123164193 (tae)  LOC123412714 (hvu)  LOC123448425 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_189288.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_189288.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
Genes directly connected with AT3G26560 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.8 emb1507 U5 small nuclear ribonucleoprotein helicase [detail] 838690
9.6 GTA2 global transcription factor group A2 [detail] 826391
9.6 AT3G15120 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820743
9.3 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing protein [detail] 844433
9.2 AT5G41770 crooked neck protein, putative / cell cycle protein [detail] 834182
7.9 AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817938
7.6 TOC132 multimeric translocon complex in the outer envelope membrane 132 [detail] 816165
7.4 STIPL1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 838277
7.2 AT5G51280 DEAD-box protein abstrakt [detail] 835202
7.2 CDC48C cell division cycle 48C [detail] 821105
6.5 SMC5 structural maintenance of chromosomes 5 [detail] 831449
6.5 AT3G22520 spindle assembly abnormal protein [detail] 821823
Coexpressed
gene list		 [Coexpressed gene list for AT3G26560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257310_at
257310_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257310_at
257310_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257310_at
257310_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822264      
Refseq ID (protein) NP_189288.1 


The preparation time of this page was 0.5 [sec].