ATTED-II : GeneID search result

[←][→] ath At3g26900 Gene

functional annotation

Function

shikimate kinase like 1

GO BP

GO:0010027 [list] [network] thylakoid membrane organization	(49 genes)	IMP
GO:0009658 [list] [network] chloroplast organization	(209 genes)	IMP

GO CC

GO:0009570 [list] [network] chloroplast stroma	(705 genes)	HDA
GO:0005829 [list] [network] cytosol	(2559 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	HDA ISM

GO MF

GO:0004765 [list] [network] shikimate kinase activity

(4 genes)

IDA

KEGG

Protein

NP_001118711.1 NP_001118712.1 NP_189325.2

BLAST

NP_001118711.1 NP_001118712.1 NP_189325.2

Orthologous

[Ortholog page] LOC4326439 (osa) LOC18107134 (ppo) LOC25495942 (mtr) LOC100526928 (gma) LOC100781076 (gma) LOC101260492 (sly) LOC103875266 (bra) LOC123057852 (tae) LOC123064856 (tae) LOC123077212 (tae) LOC123442742 (hvu)

Subcellular
localization
wolf

chlo 8, mito 2	(predict for NP_001118711.1)
chlo 8, mito 2	(predict for NP_001118712.1)
chlo 8, mito 2	(predict for NP_189325.2)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001118711.1)
chlo 9	(predict for NP_001118712.1)
chlo 9	(predict for NP_189325.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	2

Genes directly connected with SKL1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.2	SCY1	SECY homolog 1	[detail]	816386
7.5	AT5G22340	NF-kappa-B inhibitor-like protein	[detail]	832294
7.1	DEG5	DEGP protease 5	[detail]	827564
7.0	AKRP	ankyrin repeat protein	[detail]	836737

Coexpressed
gene list

[Coexpressed gene list for SKL1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258281_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258281_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258281_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	822306
Refseq ID (protein)	NP_001118711.1
	NP_001118712.1
	NP_189325.2

The preparation time of this page was 0.4 [sec].