[←][→] ath   At3g27925 Gene
functional annotation
Function   DegP protease 1      
GO BP
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IMP  
GO:0030163 [list] [network] protein catabolic process  (321 genes)  TAS  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA IDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (70 genes)  IDA  
GO:0008236 [list] [network] serine-type peptidase activity  (104 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001325789.1  NP_189431.2 
BLAST NP_001325789.1  NP_189431.2 
Orthologous [Ortholog page] LOC4339651 (osa)  LOC7496827 (ppo)  LOC11439438 (mtr)  LOC100783877 (gma)  LOC101250650 (sly)  LOC103875178 (bra)  LOC123146936 (tae)  LOC123183187 (tae)  LOC123450930 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001325789.1)
chlo 9  (predict for NP_189431.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001325789.1)
chlo 7  (predict for NP_189431.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with DEG1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.8 STN7 Serine/Threonine kinase domain protein [detail] 843215
9.0 CSK chloroplast sensor kinase [detail] 843110
8.7 ISPF isoprenoid F [detail] 842700
8.4 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein [detail] 839847
8.2 HCF164 Thioredoxin superfamily protein [detail] 829874
8.1 ACD1-LIKE ACD1-like protein [detail] 828670
7.7 AT1G32160 beta-casein (DUF760) [detail] 840108
7.6 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [detail] 841720
7.5 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II [detail] 817019
7.3 AT5G13720 Uncharacterized protein family (UPF0114) [detail] 831217
Coexpressed
gene list		 [Coexpressed gene list for DEG1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257222_at
257222_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257222_at
257222_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257222_at
257222_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822416      
Refseq ID (protein) NP_001325789.1 
NP_189431.2 


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