[←][→] ath   At3g29240 Gene
functional annotation
Function   PPR containing protein (DUF179)  
GO BP
GO:0006778 [list] [network] porphyrin-containing compound metabolic process  (217 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_566847.1  NP_850648.1 
BLAST NP_566847.1  NP_850648.1 
Orthologous [Ortholog page] LOC4348336 (osa)  LOC7472617 (ppo)  LOC11417841 (mtr)  LOC100783218 (gma)  LOC100797766 (gma)  LOC101247689 (sly)  LOC103837208 (bra)  LOC103854146 (bra)  LOC103875092 (bra)  LOC123152406 (tae)  LOC123161798 (tae)  LOC123168866 (tae)  LOC123412564 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_566847.1)
chlo 8,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_850648.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_566847.1)
chlo 4,  other 3  (predict for NP_850648.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G29240 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 RMA2 RING membrane-anchor 2 [detail] 828942
4.8 AT2G42690 alpha/beta-Hydrolases superfamily protein [detail] 818869
4.8 AT1G03400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 838751
4.5 AT1G29240 transcription initiation factor TFIID subunit, putative (DUF688) [detail] 839798
Coexpressed
gene list		 [Coexpressed gene list for AT3G29240]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257745_at
257745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257745_at
257745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257745_at
257745_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822579      
Refseq ID (protein) NP_566847.1 
NP_850648.1 


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