[←][→] ath   AT3G29290 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_001325599.1  NP_001325600.1  NP_001325601.1  NP_001325602.1  NP_189575.2 
BLAST NP_001325599.1  NP_001325600.1  NP_001325601.1  NP_001325602.1  NP_189575.2 
Orthologous [Ortholog page] LOC4332032 (osa)  LOC7467875 (ppo)  LOC11434812 (mtr)  LOC100266202 (vvi)  LOC100382024 (zma)  LOC100779515 (gma)  LOC101265496 (sly)  LOC103642304 (zma)  LOC103645655 (zma)  LOC103875086 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for NP_001325599.1)
chlo 7,  nucl 2  (predict for NP_001325600.1)
chlo 7,  nucl 2  (predict for NP_001325601.1)
chlo 7,  nucl 2  (predict for NP_001325602.1)
chlo 7,  nucl 2  (predict for NP_189575.2)
Subcellular
localization
TargetP
chlo 2  (predict for NP_001325599.1)
chlo 2  (predict for NP_001325600.1)
chlo 2  (predict for NP_001325601.1)
chlo 2  (predict for NP_001325602.1)
chlo 2  (predict for NP_189575.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with emb2076 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829206
6.5 AT3G46610 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 823814
5.9 EMB1006 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835093
Coexpressed
gene list		 [Coexpressed gene list for emb2076]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256613_at
256613_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256613_at
256613_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256613_at
256613_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822586      
Refseq ID (protein) NP_001325599.1 
NP_001325600.1 
NP_001325601.1 
NP_001325602.1 
NP_189575.2 


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