[←][→] ath   AT3G42950 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_189881.1 
BLAST NP_189881.1 
Orthologous [Ortholog page] AT1G19170 (ath)  LOC4330924 (osa)  LOC7490535 (ppo)  LOC11418613 (mtr)  LOC11441243 (mtr)  LOC100249126 (vvi)  LOC100272705 (zma)  LOC100791187 (gma)  LOC100800910 (gma)  LOC100801914 (gma)  LOC100818529 (gma)  LOC101248218 (sly)  LOC101252957 (sly)  LOC103835862 (bra)  LOC103870855 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  extr 1,  golg 1  (predict for NP_189881.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_189881.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G42950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT2G20650 RING/U-box superfamily protein [detail] 816593
5.9 AT1G19170 Pectin lyase-like superfamily protein [detail] 838500
5.9 IRX14 Nucleotide-diphospho-sugar transferases superfamily protein [detail] 829842
4.5 UNE7 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [detail] 821186
Coexpressed
gene list		 [Coexpressed gene list for AT3G42950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252781_at
252781_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252781_at
252781_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252781_at
252781_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823351      
Refseq ID (protein) NP_189881.1 


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