[←][→] ath   AT3G46460 Gene
functional annotation
Function   ubiquitin-conjugating enzyme 13  
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (71 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA IDA TAS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (37 genes)  IBA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001325532.1  NP_001325533.1  NP_566884.1 
BLAST NP_001325532.1  NP_001325533.1  NP_566884.1 
Orthologous [Ortholog page] LOC541984 (zma)  LOC542600 (zma)  UBC7 (ath)  LOC4327386 (osa)  LOC4339013 (osa)  LOC7458153 (ppo)  LOC7469818 (ppo)  LOC7469819 (ppo)  LOC11422025 (mtr)  LOC25487868 (mtr)  LOC100242812 (vvi)  LOC100264959 (vvi)  LOC100272466 (zma)  LOC100283106 (zma)  LOC100305813 (gma)  LOC100499900 (gma)  LOC100500474 (gma)  LOC101256619 (sly)  LOC101262418 (sly)  LOC101262710 (sly)  LOC101262721 (sly)  LOC103830011 (bra)  LOC103845355 (bra)  LOC103851586 (bra)  LOC103863169 (bra) 
Subcellular
localization
wolf
extr 4,  nucl 3,  chlo 1,  cyto 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001325532.1)
extr 4,  nucl 3,  chlo 1,  cyto 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001325533.1)
chlo 3,  cyto 3,  nucl 2,  extr 2  (predict for NP_566884.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001325532.1)
other 4  (predict for NP_001325533.1)
other 6  (predict for NP_566884.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03050 Proteasome 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with UBC13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 UBC7 ubiquitin-conjugating enzyme E2 [detail] 836048
5.8 PEX4 peroxin4 [detail] 832645
5.8 AT1G15860 defective in cullin neddylation protein (DUF298) [detail] 838156
5.7 AT1G28120 ubiquitin thioesterase otubain-like protein [detail] 839705
Coexpressed
gene list		 [Coexpressed gene list for UBC13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252528_at
252528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252528_at
252528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252528_at
252528_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823796      
Refseq ID (protein) NP_001325532.1 
NP_001325533.1 
NP_566884.1 


The preparation time of this page was 0.2 [sec].