ATTED-II : GeneID search result

[←][→] ath AT3G47080 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

KEGG

Protein

NP_190292.1

BLAST

NP_190292.1

Orthologous

[Ortholog page] AT2G29670 (ath) AT1G07280 (ath) LOC4324827 (osa) LOC4338950 (osa) LOC7468573 (ppo) LOC7490338 (ppo) LOC11413741 (mtr) LOC25490845 (mtr) LOC100253483 (vvi) LOC100255315 (vvi) LOC100275225 (zma) LOC100275415 (zma) LOC100277843 (zma) LOC100501832 (zma) LOC100775399 (gma) LOC100781766 (gma) LOC100791735 (gma) LOC100799508 (gma) LOC101255300 (sly) LOC101258865 (sly) LOC103843466 (bra) LOC103843960 (bra) LOC103864985 (bra) LOC103868016 (bra) LOC103873264 (bra) LOC103873589 (bra)

Subcellular
localization
wolf

chlo 9

(predict for NP_190292.1)

Subcellular
localization
TargetP

chlo 6

(predict for NP_190292.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G47080 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.6	AT3G55640	Mitochondrial substrate carrier family protein	[detail]	824730
4.5	PEPKR1	phosphoenolpyruvate carboxylase-related kinase 1	[detail]	837815
4.3	AT1G07870	Protein kinase superfamily protein	[detail]	837302
3.8	AT5G15240	Transmembrane amino acid transporter family protein	[detail]	831376

Coexpressed
gene list

[Coexpressed gene list for AT3G47080]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252467_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252467_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252467_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	823861
Refseq ID (protein)	NP_190292.1

The preparation time of this page was 0.2 [sec].