[←][→] ath   At3g47120 Gene
functional annotation
Function   RNA recognition motif (RRM)-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0016607 [list] [network] nuclear speck  (50 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001327717.1  NP_190296.1 
BLAST NP_001327717.1  NP_190296.1 
Orthologous [Ortholog page] LOC4334639 (osa)  LOC7468567 (ppo)  LOC11406304 (mtr)  LOC100792988 (gma)  LOC100814734 (gma)  LOC101251965 (sly)  LOC103873259 (bra)  LOC123043999 (tae)  LOC123051873 (tae)  LOC123105743 (tae)  LOC123123569 (tae)  LOC123187752 (tae)  LOC123453129 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001327717.1)
nucl 9  (predict for NP_190296.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327717.1)
other 8  (predict for NP_190296.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G47120 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.4 AT1G55460 DNA/RNA-binding protein Kin17, conserved region [detail] 841993
8.5 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835661
8.4 MOS2 D111/G-patch domain-containing protein [detail] 840246
7.1 AtRZ-1b RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [detail] 842359
6.7 AT3G29310 calmodulin-binding protein-like protein [detail] 822589
5.2 PP2-B1 phloem protein 2-B1 [detail] 814754
5.2 AT3G59640 glycine-rich protein [detail] 825133
Coexpressed
gene list		 [Coexpressed gene list for AT3G47120]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252453_at
252453_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252453_at
252453_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252453_at
252453_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823865      
Refseq ID (protein) NP_001327717.1 
NP_190296.1 


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