[←][→] ath   AT3G47390 Gene
functional annotation
Function   cytidine/deoxycytidylate deaminase family protein  
GO BP
GO:0046443 [list] [network] FAD metabolic process  (4 genes)  IMP  
GO:0009231 [list] [network] riboflavin biosynthetic process  (12 genes)  IEA  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:1901135 [list] [network] carbohydrate derivative metabolic process  (662 genes)  IDA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0008703 [list] [network] 5-amino-6-(5-phosphoribosylamino)uracil reductase activity  (1 genes)  IDA NAS  
GO:0008835 [list] [network] diaminohydroxyphosphoribosylaminopyrimidine deaminase activity  (2 genes)  IBA  
GO:0016799 [list] [network] hydrolase activity, hydrolyzing N-glycosyl compounds  (35 genes)  IDA  
GO:0050661 [list] [network] NADP binding  (65 genes)  IEA  
KEGG ath00740 [list] [network] Riboflavin metabolism (18 genes)
Protein NP_001190026.1  NP_190323.1 
BLAST NP_001190026.1  NP_190323.1 
Orthologous [Ortholog page] LOC4329349 (osa)  LOC25498913 (mtr)  LOC100264997 (vvi)  LOC100801283 (gma)  LOC100812653 (gma)  LOC101202729 (zma)  LOC101248871 (sly)  LOC103873252 (bra) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for NP_001190026.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_190323.1)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for NP_001190026.1)
chlo 3,  mito 3  (predict for NP_190323.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PHS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 AT2G32040 Major facilitator superfamily protein [detail] 817764
5.3 SCY2 SecY protein transport family protein [detail] 817711
5.1 CRTISO carotenoid isomerase [detail] 837193
Coexpressed
gene list		 [Coexpressed gene list for PHS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252438_at
252438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252438_at
252438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252438_at
252438_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823893      
Refseq ID (protein) NP_001190026.1 
NP_190323.1 


The preparation time of this page was 0.2 [sec].