[][] ath   At3g47390 Gene
functional annotation
Function   cytidine/deoxycytidylate deaminase family protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0046443 [list] [network] FAD metabolic process  (3 genes)  IMP  
GO:0009231 [list] [network] riboflavin biosynthetic process  (8 genes)  IEA  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:1901135 [list] [network] carbohydrate derivative metabolic process  (589 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0008703 [list] [network] 5-amino-6-(5-phosphoribosylamino)uracil reductase activity  (1 genes)  IDA NAS  
GO:0016799 [list] [network] hydrolase activity, hydrolyzing N-glycosyl compounds  (61 genes)  IDA  
KEGG ath00740 [list] [network] Riboflavin metabolism (20 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_001190026.1  NP_190323.1 
BLAST NP_001190026.1  NP_190323.1 
Orthologous [Ortholog page] LOC4329349 (osa)LOC7459224 (ppo)LOC25498913 (mtr)LOC100801283 (gma)LOC100812653 (gma)LOC101248871 (sly)LOC103873252 (bra)LOC123129003 (tae)LOC123139880 (tae)LOC123146180 (tae)LOC123405875 (hvu)
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for NP_001190026.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_190323.1)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for NP_001190026.1)
chlo 3,  mito 3  (predict for NP_190323.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PHS1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.6 AT2G32040 Major facilitator superfamily protein [detail] 817764
6.3 AT1G65950 Protein kinase superfamily protein [detail] 842907
6.1 CRTISO carotenoid isomerase [detail] 837193
5.9 SCY2 SecY protein transport family protein [detail] 817711
5.9 AT5G64830 programmed cell death 2 C-terminal domain-containing protein [detail] 836606
Coexpressed
gene list
[Coexpressed gene list for PHS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252438_at
252438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252438_at
252438_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252438_at
252438_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 823893    
Refseq ID (protein) NP_001190026.1 
NP_190323.1 


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