[][] ath   AT3G47520 Gene
functional annotation
Function   malate dehydrogenase
GO BP
GO:0006108 [list] [network] malate metabolic process  (17 genes)  IEA  
GO:0045037 [list] [network] protein import into chloroplast stroma  (25 genes)  IMP  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IDA  
GO CC
GO:0010319 [list] [network] stromule  (33 genes)  IDA  
GO:0009706 [list] [network] chloroplast inner membrane  (80 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009532 [list] [network] plastid stroma  (757 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0008746 [list] [network] NAD(P)+ transhydrogenase activity  (2 genes)  IMP  
GO:0016464 [list] [network] chloroplast protein-transporting ATPase activity  (6 genes)  IDA  
GO:0030060 [list] [network] L-malate dehydrogenase activity  (7 genes)  IBA IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (121 genes)
ath00620 [list] [network] Pyruvate metabolism (86 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_190336.1 
BLAST NP_190336.1 
Orthologous [Ortholog page] LOC4327423 (osa)LOC4343993 (osa)LOC4345657 (osa)LOC100193663 (zma)LOC100193743 (zma)LOC100247511 (vvi)LOC100265585 (vvi)LOC100783173 (gma)LOC100814078 (gma)LOC101248141 (sly)LOC101258932 (sly)LOC103873232 (bra)LOC107305678 (zma)
Subcellular
localization
wolf
chlo 9  (predict for NP_190336.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_190336.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 13
ath00010 Glycolysis / Gluconeogenesis 7
ath01230 Biosynthesis of amino acids 7
ath00710 Carbon fixation in photosynthetic organisms 6
ath00030 Pentose phosphate pathway 5
Genes directly connected with MDH on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.1 LOS2 Enolase [detail] 818226
7.8 AT5G41670 6-phosphogluconate dehydrogenase family protein [detail] 834169
7.6 AAC1 ADP/ATP carrier 1 [detail] 820005
5.9 AT1G31500 DNAse I-like superfamily protein [detail] 840040
4.8 EMB2024 NagB/RpiA/CoA transferase-like superfamily protein [detail] 832511
Coexpressed
gene list
[Coexpressed gene list for MDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252407_at
252407_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252407_at
252407_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252407_at
252407_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 823906    
Refseq ID (protein) NP_190336.1 


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