[←][→] ath   At3g47520 Gene
functional annotation
Function   malate dehydrogenase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006108 [list] [network] malate metabolic process  (14 genes)  IEA  
GO:0045037 [list] [network] protein import into chloroplast stroma  (24 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO CC
GO:0062091 [list] [network] Ycf2/FtsHi complex  (6 genes)  IDA  
GO:0010319 [list] [network] stromule  (37 genes)  IDA  
GO:0009706 [list] [network] chloroplast inner membrane  (61 genes)  IDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0008746 [list] [network] NAD(P)+ transhydrogenase activity  (2 genes)  IMP  
GO:0030060 [list] [network] L-malate dehydrogenase activity  (3 genes)  IDA  
GO:0016464 [list] [network] chloroplast protein-transporting ATPase activity  (8 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath00620 [list] [network] Pyruvate metabolism (97 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath00710 [list] [network] Carbon fixation in photosynthetic organisms (69 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_190336.1 
BLAST NP_190336.1 
Orthologous [Ortholog page] LOC4327423 (osa)  LOC4343993 (osa)  LOC4345657 (osa)  LOC18097666 (ppo)  LOC18107367 (ppo)  LOC18107368 (ppo)  LOC100783173 (gma)  LOC100814078 (gma)  LOC101248141 (sly)  LOC101258932 (sly)  LOC103873232 (bra)  LOC120580136 (mtr)  LOC123063924 (tae)  LOC123141350 (tae)  LOC123148291 (tae)  LOC123157230 (tae)  LOC123169447 (tae)  LOC123182718 (tae)  LOC123407884 (hvu)  LOC123448865 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_190336.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_190336.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath01230 Biosynthesis of amino acids 8
ath00010 Glycolysis / Gluconeogenesis 7
ath00710 Carbon fixation in photosynthetic organisms 5
ath00030 Pentose phosphate pathway 4
Genes directly connected with MDH on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 AT5G41670 6-phosphogluconate dehydrogenase family protein [detail] 834169
7.2 AAC1 ADP/ATP carrier 1 [detail] 820005
7.1 LOS2 Enolase [detail] 818226
6.7 AT2G17630 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [detail] 816270
6.3 AT1G31500 DNAse I-like superfamily protein [detail] 840040
Coexpressed
gene list		 [Coexpressed gene list for MDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252407_at
252407_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252407_at
252407_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252407_at
252407_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823906      
Refseq ID (protein) NP_190336.1 


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