[←][→] ath   AT3G48030 Gene
functional annotation
Function   hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA IEA  
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_001326258.1  NP_190386.1 
BLAST NP_001326258.1  NP_190386.1 
Orthologous [Ortholog page] LOC4346912 (osa)  LOC100263814 (vvi)  LOC100281013 (zma)  LOC100500416 (gma)  LOC101260605 (sly)  LOC103873177 (bra)  LOC112416521 (mtr) 
Subcellular
localization
wolf
chlo 5,  nucl 1,  mito 1,  cysk_nucl 1,  cyto 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001326258.1)
cyto 5,  nucl 4  (predict for NP_190386.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326258.1)
other 7  (predict for NP_190386.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
Genes directly connected with AT3G48030 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT4G13615 Uncharacterized protein family SERF [detail] 826995
5.2 AT3G18410 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6) [detail] 821370
4.6 AT1G49140 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6) [detail] 841337
Coexpressed
gene list		 [Coexpressed gene list for AT3G48030]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252401_at
252401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252401_at
252401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252401_at
252401_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823958      
Refseq ID (protein) NP_001326258.1 
NP_190386.1 


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