[←][→] ath   At3g48050 Gene
functional annotation
Function   protein SUO    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0035278 [list] [network] miRNA-mediated gene silencing by inhibition of translation  (1 genes)  IDA  
GO:0031053 [list] [network] primary miRNA processing  (9 genes)  IMP  
GO CC
GO:0000932 [list] [network] P-body  (32 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0003682 [list] [network] chromatin binding  (105 genes)  IEA  
KEGG
Protein NP_190388.2  NP_850669.2 
BLAST NP_190388.2  NP_850669.2 
Orthologous [Ortholog page] AT3G48060 (ath)  LOC4330691 (osa)  LOC4330692 (osa)  LOC7458023 (ppo)  LOC7474882 (ppo)  LOC7474885 (ppo)  LOC7483479 (ppo)  LOC25495221 (mtr)  LOC100780436 (gma)  LOC100788512 (gma)  LOC100796021 (gma)  LOC100806155 (gma)  LOC101252674 (sly)  LOC101255308 (sly)  LOC103837430 (bra)  LOC103837431 (bra)  LOC112998769 (gma)  LOC123128394 (tae)  LOC123128395 (tae)  LOC123138254 (tae)  LOC123138257 (tae)  LOC123145513 (tae)  LOC123145514 (tae)  LOC123401861 (hvu)  LOC123402758 (hvu) 
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 2,  cyto_mito 1,  nucl 1  (predict for NP_190388.2)
chlo 4,  chlo_mito 4,  mito 2,  cyto_mito 1,  nucl 1  (predict for NP_850669.2)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for NP_190388.2)
mito 6,  chlo 4  (predict for NP_850669.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SUO on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.9 AT3G48060 BAH and TFIIS domain-containing protein [detail] 823961
10.8 CCT RNA polymerase II transcription mediator [detail] 827954
9.5 AT3G63070 Tudor/PWWP/MBT domain-containing protein [detail] 825482
9.2 UBP16 ubiquitin-specific protease 16 [detail] 828558
9.0 AT4G29790 serine/arginine repetitive matrix protein [detail] 829101
8.7 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein [detail] 831529
8.3 AT4G30100 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 829133
8.2 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [detail] 837039
8.1 FAB1A 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A [detail] 829460
6.8 AT3G21295 Tudor/PWWP/MBT superfamily protein [detail] 5008017
6.0 MKP1 mitogen-activated protein kinase phosphatase 1 [detail] 824693
Coexpressed
gene list		 [Coexpressed gene list for SUO]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 823960      
Refseq ID (protein) NP_190388.2 
NP_850669.2 


The preparation time of this page was 0.5 [sec].