[←][→] ath   AT3G48430 Gene
functional annotation
Function   relative of early flowering 6  
GO BP
GO:0035067 [list] [network] negative regulation of histone acetylation  (6 genes)  IMP  
GO:0033169 [list] [network] histone H3-K9 demethylation  (7 genes)  IMP  
GO:0006338 [list] [network] chromatin remodeling  (51 genes)  IBA  
GO:0009741 [list] [network] response to brassinosteroid  (109 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IMP  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0035097 [list] [network] histone methyltransferase complex  (18 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0034647 [list] [network] histone demethylase activity (H3-trimethyl-K4 specific)  (8 genes)  IBA  
GO:0032452 [list] [network] histone demethylase activity  (14 genes)  IBA  
GO:0051213 [list] [network] dioxygenase activity  (147 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001326576.1  NP_680116.2 
BLAST NP_001326576.1  NP_680116.2 
Orthologous [Ortholog page] LOC4324980 (osa)  LOC7484447 (ppo)  LOC25489508 (mtr)  LOC100241632 (vvi)  LOC100775271 (gma)  LOC100775813 (gma)  LOC100810437 (gma)  LOC100810972 (gma)  LOC101257458 (sly)  LOC103636385 (zma)  LOC103873145 (bra) 
Subcellular
localization
wolf
nucl 4,  vacu 4,  chlo 1  (predict for NP_001326576.1)
nucl 10  (predict for NP_680116.2)
Subcellular
localization
TargetP
mito 2  (predict for NP_001326576.1)
other 5  (predict for NP_680116.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00310 Lysine degradation 2
Genes directly connected with REF6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 MBD9 methyl-CPG-binding domain 9 [detail] 821132
7.5 AT5G46070 Guanylate-binding family protein [detail] 834648
7.4 AT5G22760 PHD finger family protein [detail] 832339
6.7 JMJ14 JUMONJI 14 [detail] 827788
6.7 AT1G27850 RUN/FYVE domain protein [detail] 839678
6.0 AT4G12640 RNA recognition motif (RRM)-containing protein [detail] 826877
5.9 AT2G23520 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [detail] 816884
5.8 SUVH1 SU(VAR)3-9 homolog 1 [detail] 830376
5.5 FAR1 FRS (FAR1 Related Sequences) transcription factor family [detail] 827173
Coexpressed
gene list		 [Coexpressed gene list for REF6]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824002      
Refseq ID (protein) NP_001326576.1 
NP_680116.2 


The preparation time of this page was 0.2 [sec].