[←][→] ath   At3g48710 Gene
functional annotation
Function   DEK domain-containing chromatin associated protein      
GO BP
GO:0006338 [list] [network] chromatin remodeling  (106 genes)  ISS  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  ISS  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  ISS  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  ISS  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISS  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0042393 [list] [network] histone binding  (66 genes)  ISS  
GO:0003682 [list] [network] chromatin binding  (105 genes)  ISS  
KEGG
Protein NP_190440.1 
BLAST NP_190440.1 
Orthologous [Ortholog page] AT5G63550 (ath)  LOC4327229 (osa)  LOC11435067 (mtr)  LOC18103817 (ppo)  LOC18105862 (ppo)  LOC100779284 (gma)  LOC100785644 (gma)  LOC100788998 (gma)  LOC100813123 (gma)  LOC101249339 (sly)  LOC101264938 (sly)  LOC103837477 (bra)  LOC103873519 (bra)  LOC103873766 (bra)  LOC123063153 (tae)  LOC123072057 (tae)  LOC123080343 (tae)  LOC123445278 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_190440.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190440.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT3G48710 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 AT4G08310 DNA ligase [detail] 826385
9.2 AT1G15940 Tudor/PWWP/MBT superfamily protein [detail] 838164
8.1 PRP40A pre-mRNA-processing protein 40A [detail] 841057
6.7 RDM4 RNA-directed DNA methylation 4 [detail] 817578
5.9 AT2G26470 embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein [detail] 817188
Coexpressed
gene list		 [Coexpressed gene list for AT3G48710]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252319_at
252319_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252319_at
252319_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252319_at
252319_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824032      
Refseq ID (protein) NP_190440.1 


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