[←][→] ath   At3g50220 Gene
functional annotation
Function   IRREGULAR XYLEM protein (DUF579)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045492 [list] [network] xylan biosynthetic process  (28 genes)  IMP  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (97 genes)  IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  IDA  
GO MF
KEGG
Protein NP_190591.1 
BLAST NP_190591.1 
Orthologous [Ortholog page] AT2G15440 (ath)  IRX15-L (ath)  LOC4328366 (osa)  LOC4337222 (osa)  LOC4341892 (osa)  LOC7462596 (ppo)  LOC7476398 (ppo)  LOC7490049 (ppo)  LOC7492052 (ppo)  LOC25493480 (mtr)  LOC25494449 (mtr)  LOC25494450 (mtr)  LOC100780760 (gma)  LOC100784765 (gma)  LOC100790865 (gma)  LOC100803555 (gma)  LOC100812777 (gma)  LOC100817866 (gma)  LOC101244631 (sly)  LOC101257020 (sly)  LOC101267962 (sly)  LOC103829528 (bra)  LOC103840933 (bra)  LOC103847994 (bra)  LOC103860420 (bra)  LOC123047110 (tae)  LOC123054922 (tae)  LOC123132348 (tae)  LOC123136396 (tae)  LOC123143904 (tae)  LOC123148884 (tae)  LOC123159026 (tae)  LOC123166253 (tae)  LOC123190771 (tae)  LOC123403345 (hvu)  LOC123412436 (hvu)  LOC123431035 (hvu) 
Subcellular
localization
wolf
mito 4,  chlo 3,  vacu 1,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for NP_190591.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_190591.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with IRX15 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.5 CTL2 chitinase-like protein [detail] 820947
15.9 GAUT12 galacturonosyltransferase 12 [detail] 835558
15.8 PGSIP1 plant glycogenin-like starch initiation protein 1 [detail] 821397
15.3 NAC073 NAC domain containing protein 73 [detail] 828968
10.8 PGSIP3 plant glycogenin-like starch initiation protein 3 [detail] 829469
9.9 AT1G13635 DNA glycosylase superfamily protein [detail] 2745751
7.5 IRX15-L IRREGULAR XYLEM protein (DUF579) [detail] 836856
5.6 AT2G47670 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 819380
4.9 PARVUS Nucleotide-diphospho-sugar transferases superfamily protein [detail] 838512
Coexpressed
gene list		 [Coexpressed gene list for IRX15]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252211_at
252211_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252211_at
252211_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252211_at
252211_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824184      
Refseq ID (protein) NP_190591.1 


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