[←][→] ath   At3g51040 Gene
functional annotation
Function   RTE1-homolog    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0023056 [list] [network] positive regulation of signaling  (96 genes)  IGI  
GO:0009723 [list] [network] response to ethylene  (241 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04016 [list] [network] MAPK signaling pathway - plant (139 genes)
Protein NP_001078268.1  NP_190673.1  NP_974408.1 
BLAST NP_001078268.1  NP_190673.1  NP_974408.1 
Orthologous [Ortholog page] LOC778265 (sly)  LOC4334443 (osa)  LOC7480152 (ppo)  LOC11412169 (mtr)  LOC100527909 (gma)  LOC100786957 (gma)  LOC103872640 (bra)  LOC123105450 (tae)  LOC123113736 (tae)  LOC123123248 (tae)  LOC123452768 (hvu) 
Subcellular
localization
wolf
plas 4,  E.R. 2,  nucl_plas 2,  golg_plas 2  (predict for NP_001078268.1)
plas 4,  E.R. 2,  nucl_plas 2,  golg_plas 2  (predict for NP_190673.1)
plas 4,  E.R. 2,  nucl_plas 2,  golg_plas 2  (predict for NP_974408.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078268.1)
other 9  (predict for NP_190673.1)
other 9  (predict for NP_974408.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with RTH on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 AT4G15475 F-box/RNI-like superfamily protein [detail] 827219
6.4 YLS8 mRNA splicing factor, thioredoxin-like U5 snRNP [detail] 830725
6.3 SYP51 syntaxin of plants 51 [detail] 838193
6.3 AT1G47310 signal peptidase I [detail] 841134
5.5 AT3G03180 Got1/Sft2-like vescicle transport protein family [detail] 821059
5.5 DSPTP1 dual specificity protein phosphatase 1 [detail] 821941
5.2 PIS2 Putative CDP-diacylglycerol-inositol 3-phosphatidyltransferase 2 [detail] 830014
Coexpressed
gene list		 [Coexpressed gene list for RTH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252125_at
252125_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252125_at
252125_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252125_at
252125_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824268      
Refseq ID (protein) NP_001078268.1 
NP_190673.1 
NP_974408.1 


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