[←][→] ath   AT3G51290 Gene
functional annotation
Function   pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632)  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001190052.1  NP_001327368.1  NP_190697.2 
BLAST NP_001190052.1  NP_001327368.1  NP_190697.2 
Orthologous [Ortholog page] LOC9267514 (osa)  LOC11429413 (mtr)  LOC100245548 (vvi)  LOC100280278 (zma)  LOC100808077 (gma)  LOC101264882 (sly)  LOC102662030 (gma)  LOC102664706 (gma)  LOC103841050 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001190052.1)
nucl 9,  cysk 1,  golg_plas 1  (predict for NP_001327368.1)
nucl 9,  plas 1,  golg_plas 1  (predict for NP_190697.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001190052.1)
other 6  (predict for NP_001327368.1)
other 6  (predict for NP_190697.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT3G51290 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT5G48360 Actin-binding FH2 (formin homology 2) family protein [detail] 834889
6.2 AT4G21820 binding / calmodulin binding protein [detail] 828270
5.8 PME5 Pectin lyase-like superfamily protein [detail] 834800
5.7 NAKR2 Chloroplast-targeted copper chaperone protein [detail] 818315
5.1 AT3G63450 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 825520
3.9 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 829847
Coexpressed
gene list		 [Coexpressed gene list for AT3G51290]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252149_at
252149_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252149_at
252149_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252149_at
252149_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824292      
Refseq ID (protein) NP_001190052.1 
NP_001327368.1 
NP_190697.2 


The preparation time of this page was 0.1 [sec].