[←][→] ath   At3g52170 Gene
functional annotation
Function   DNA binding protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  ISS  
KEGG
Protein NP_001190069.1  NP_001325656.1  NP_001325657.1  NP_190785.2 
BLAST NP_001190069.1  NP_001325656.1  NP_001325657.1  NP_190785.2 
Orthologous [Ortholog page] LOC4352388 (osa)  LOC18101336 (ppo)  LOC25484852 (mtr)  LOC100778620 (gma)  LOC100791460 (gma)  LOC101259105 (sly)  LOC103860748 (bra)  LOC112328771 (ppo)  LOC123102668 (tae)  LOC123110852 (tae)  LOC123119865 (tae)  LOC123452473 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  vacu 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_001190069.1)
chlo 8,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_001325656.1)
chlo 8,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_001325657.1)
chlo 6,  nucl 1,  vacu 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_190785.2)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_001190069.1)
chlo 4,  other 3  (predict for NP_001325656.1)
chlo 4,  other 3  (predict for NP_001325657.1)
chlo 4,  other 3  (predict for NP_190785.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G52170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837383
7.2 FLN2 fructokinase-like protein [detail] 843251
6.9 RFC3 Translation elongation factor EF1B/ribosomal protein S6 family protein [detail] 820974
Coexpressed
gene list		 [Coexpressed gene list for AT3G52170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256675_at
256675_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256675_at
256675_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256675_at
256675_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824382      
Refseq ID (protein) NP_001190069.1 
NP_001325656.1 
NP_001325657.1 
NP_190785.2 


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