[←][→] ath   AT3G52660 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0006397 [list] [network] mRNA processing  (376 genes)  IBA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_001030849.1  NP_001327786.1  NP_190834.1 
BLAST NP_001030849.1  NP_001327786.1  NP_190834.1 
Orthologous [Ortholog page] AT5G28390 (ath)  LOC4349728 (osa)  LOC4351445 (osa)  LOC7460062 (ppo)  LOC7467576 (ppo)  LOC7492252 (ppo)  LOC11410526 (mtr)  LOC11433563 (mtr)  LOC25492284 (mtr)  LOC100259599 (vvi)  LOC100267377 (vvi)  LOC100279765 (zma)  LOC100785076 (gma)  LOC100798476 (gma)  LOC100806658 (gma)  LOC101253016 (sly)  LOC103640663 (zma)  LOC103647119 (zma)  LOC103841195 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for NP_001030849.1)
nucl 9,  chlo 1  (predict for NP_001327786.1)
nucl 9,  chlo 1  (predict for NP_190834.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001030849.1)
other 8  (predict for NP_001327786.1)
other 8  (predict for NP_190834.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G52660 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 ATO splicing factor-like protein [detail] 830503
8.0 AT1G15200 protein-protein interaction regulator family protein [detail] 838086
7.8 AT2G29210 splicing factor PWI domain-containing protein [detail] 817470
6.4 AT4G17620 glycine-rich protein [detail] 827482
4.8 AT4G22350 Ubiquitin C-terminal hydrolases superfamily protein [detail] 828330
Coexpressed
gene list		 [Coexpressed gene list for AT3G52660]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824432      
Refseq ID (protein) NP_001030849.1 
NP_001327786.1 
NP_190834.1 


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