[←][→] ath   At3g53760 Gene
functional annotation
Function   GAMMA-TUBULIN COMPLEX PROTEIN 4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0007020 [list] [network] microtubule nucleation  (9 genes)  IMP  
GO:0043622 [list] [network] cortical microtubule organization  (43 genes)  IMP  
GO:0009624 [list] [network] response to nematode  (86 genes)  IDA  
GO CC
GO:0045298 [list] [network] tubulin complex  (13 genes)  IDA  
GO:0005819 [list] [network] spindle  (53 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001325626.1  NP_001325627.1  NP_190944.2 
BLAST NP_001325626.1  NP_001325627.1  NP_190944.2 
Orthologous [Ortholog page] LOC4337843 (osa)  LOC7491297 (ppo)  LOC11416818 (mtr)  LOC100786441 (gma)  LOC100819794 (gma)  LOC101244901 (sly)  LOC103841300 (bra)  LOC123113125 (tae)  LOC123180547 (tae)  LOC123191584 (tae)  LOC123425757 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 3,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001325626.1)
nucl 6,  cyto 3,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001325627.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_190944.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001325626.1)
other 5  (predict for NP_001325627.1)
other 5  (predict for NP_190944.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with GCP4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AT4G38480 Transducin/WD40 repeat-like superfamily protein [detail] 830004
5.9 SCO3 SNOWY COTYLEDON protein (DUF566) [detail] 821494
5.7 AT4G35880 Eukaryotic aspartyl protease family protein [detail] 829742
4.9 AT1G63480 AT hook motif DNA-binding family protein [detail] 842654
4.8 IQD5 IQ-domain 5 [detail] 821783
4.5 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 832510
Coexpressed
gene list		 [Coexpressed gene list for GCP4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251907_at
251907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251907_at
251907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251907_at
251907_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824543      
Refseq ID (protein) NP_001325626.1 
NP_001325627.1 
NP_190944.2 


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