[←][→] ath   At3g53940 Gene
functional annotation
Function   Mitochondrial substrate carrier family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0055085 [list] [network] transmembrane transport  (525 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001325776.1  NP_190962.2 
BLAST NP_001325776.1  NP_190962.2 
Orthologous [Ortholog page] AT2G37890 (ath)  AT3G55640 (ath)  LOC4325457 (osa)  LOC4332367 (osa)  LOC7468021 (ppo)  LOC7486532 (ppo)  LOC7487984 (ppo)  LOC7490365 (ppo)  LOC11406696 (mtr)  LOC11413479 (mtr)  LOC100777563 (gma)  LOC100788060 (gma)  LOC100801749 (gma)  LOC100813211 (gma)  LOC101246369 (sly)  LOC103841475 (bra)  LOC103857743 (bra)  LOC103863275 (bra)  LOC103865633 (bra)  LOC123060047 (tae)  LOC123068525 (tae)  LOC123077028 (tae)  LOC123085400 (tae)  LOC123092635 (tae)  LOC123097943 (tae)  LOC123442632 (hvu)  LOC123449053 (hvu) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  plas 1  (predict for NP_001325776.1)
cyto 7,  vacu 1,  E.R._vacu 1,  chlo 1,  nucl 1  (predict for NP_190962.2)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001325776.1)
other 6,  mito 3  (predict for NP_190962.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03020 RNA polymerase 2
Genes directly connected with AT3G53940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.4 AT2G18900 Transducin/WD40 repeat-like superfamily protein [detail] 816406
10.7 TOC64-V translocon at the outer membrane of chloroplasts 64-V [detail] 830801
9.7 GRP23 glutamine-rich protein 23 [detail] 837566
7.7 AT1G80245 Spc97 / Spc98 family of spindle pole body (SBP) component [detail] 844365
Coexpressed
gene list		 [Coexpressed gene list for AT3G53940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251915_at
251915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251915_at
251915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251915_at
251915_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824561      
Refseq ID (protein) NP_001325776.1 
NP_190962.2 


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