[←][→] ath   At3g54250 Gene
functional annotation
Function   GHMP kinase family protein      
GO BP
GO:0019287 [list] [network] isopentenyl diphosphate biosynthetic process, mevalonate pathway  (7 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004163 [list] [network] diphosphomevalonate decarboxylase activity  (2 genes)  IDA  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_001325821.1  NP_566995.1 
BLAST NP_001325821.1  NP_566995.1 
Orthologous [Ortholog page] MVD1 (ath)  LOC4328034 (osa)  LOC7477172 (ppo)  LOC7490899 (ppo)  LOC25485588 (mtr)  MDC (sly)  LOC100785593 (gma)  LOC100800990 (gma)  MPPDC1 (sly)  LOC103841340 (bra)  LOC103863245 (bra)  LOC123080934 (tae)  LOC123105429 (tae)  LOC123113703 (tae)  LOC123123228 (tae)  LOC123441095 (hvu)  LOC123452736 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001325821.1)
cyto 4,  chlo 4,  nucl 1  (predict for NP_566995.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001325821.1)
other 6  (predict for NP_566995.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00100 Steroid biosynthesis 2
Genes directly connected with AT3G54250 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.8 FPS2 farnesyl diphosphate synthase 2 [detail] 827430
6.6 AT5G45560 Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein [detail] 834592
6.3 ORP1D OSBP(oxysterol binding protein)-related protein 1D [detail] 837875
4.8 MAN2 Glycosyl hydrolase superfamily protein [detail] 816596
4.8 PLP3a thioredoxin domain PLP3A-like protein [detail] 824260
Coexpressed
gene list		 [Coexpressed gene list for AT3G54250]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251881_at
251881_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251881_at
251881_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251881_at
251881_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824592      
Refseq ID (protein) NP_001325821.1 
NP_566995.1 


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